Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC093655.2-201ENST00000425735 631 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC004854.1-201ENST00000440356 349 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC023512.1-201ENST00000444513 499 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 FAR2P1-206ENST00000449736 709 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 RPSAP50-201ENST00000481955 852 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 UBA52P7-201ENST00000486088 380 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 COX6B1P2-201ENST00000489624 230 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 RN7SL205P-201ENST00000490174 284 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 MTCO3P27-201ENST00000514397 196 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 BLZF2P-201ENST00000553776 1130 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC108359.1-201ENST00000616451 1211 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC099654.9-201ENST00000637055 678 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC073869.8-201ENST00000641806 335 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC073136.1-201ENST00000449426 2884 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC008079.2-201ENST00000623543 20396 ntBASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKIPSDQ9NZQ3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC112198.2-201ENST00000426589 6996 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 MIR137-201ENST00000385223 102 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 MIR765-201ENST00000390226 114 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 RPL12P17-201ENST00000432393 498 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 RPL19P16-201ENST00000433839 588 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 OR52B5P-201ENST00000435337 951 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 OR52E3P-201ENST00000452083 936 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 CALM1P2-201ENST00000452941 448 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC021205.1-201ENST00000468797 348 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 RN7SL222P-201ENST00000476452 299 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 RPS4XP1-201ENST00000482189 787 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC004453.1-201ENST00000487895 408 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 IGBP1P4-201ENST00000503202 879 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 HMGN1P9-201ENST00000515212 298 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 CIR1P1-201ENST00000524055 1133 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 SOX5P1-201ENST00000524155 1127 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 C1DP5-201ENST00000525775 383 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 YWHAZP1-201ENST00000556286 722 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AL049838.1-201ENST00000563647 981 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AP005403.1-201ENST00000579720 229 ntBASIC5.38□□□□□ -1.55
NCKIPSDQ9NZQ3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms