Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AL442639.1-201ENST00000625030 1899 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AL513548.1-201ENST00000562904 1724 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 ZFRP1-201ENST00000457579 2970 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 SNORA74A-201ENST00000364089 198 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 SNORA51.8-201ENST00000384234 132 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 SNORD96B-201ENST00000386148 79 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 SPTLC1P2-201ENST00000407089 121 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 RCC2P2-201ENST00000422174 918 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC007559.1-201ENST00000428736 355 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 PRPF38AP2-201ENST00000438179 851 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 RPS26P2-201ENST00000440331 348 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AL606490.8-201ENST00000441624 319 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 NPM1P19-201ENST00000450070 712 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 MORF4L1P4-201ENST00000450245 976 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC108463.1-201ENST00000450258 347 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 RN7SL214P-201ENST00000487317 265 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC117525.1-201ENST00000515228 503 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 LINC00557-201ENST00000563184 1279 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC009117.1-201ENST00000563948 554 ntBASIC5.09□□□□□ -1.59
SIX2Q9NPC8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX2Q9NPC8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SIX2Q9NPC8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
SIX2Q9NPC8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIX2Q9NPC8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 TCP1P3-201ENST00000414406 1498 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 RNU6-152P-201ENST00000384037 107 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 UBE2V1P15-201ENST00000407776 448 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 Z74021.1-201ENST00000423610 407 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 Z80107.2-201ENST00000445127 392 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 RPS5P7-201ENST00000456664 608 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AC008628.1-201ENST00000508663 265 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 SETP12-201ENST00000514068 805 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 RN7SKP46-201ENST00000515942 234 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 IGLV2-28-201ENST00000520681 304 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 MTND2P17-201ENST00000550281 688 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AC026790.2-201ENST00000606282 430 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AC133644.2-201ENST00000608142 540 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.08□□□□□ -1.6
SIX2Q9NPC8 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX2Q9NPC8 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 RNU6-618P-201ENST00000363518 112 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AL357078.2-201ENST00000416486 427 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC013410.2-201ENST00000422627 201 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 368.1 ms