Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RNU6-707P-201ENST00000364647 95 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RNY3P10-201ENST00000384764 102 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL360271.1-201ENST00000395679 510 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL157702.1-201ENST00000398764 426 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL512430.2-201ENST00000406786 339 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 VTA1P1-201ENST00000414044 866 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 Z99497.1-201ENST00000421282 135 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 UBE2V1P8-201ENST00000437166 265 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 ELOCP10-201ENST00000440624 327 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 SNRPEP8-201ENST00000442866 260 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RPL5P10-201ENST00000445207 894 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 EEF1E1P1-201ENST00000446998 430 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 WASF1P1-201ENST00000447560 1131 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RANP2-201ENST00000456833 229 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RN7SL643P-201ENST00000471845 291 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RN7SL369P-201ENST00000477138 299 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 PRDX4P1-201ENST00000507189 574 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC090071.1-201ENST00000507713 644 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC008055.1-201ENST00000547032 609 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC009729.1-201ENST00000548873 1133 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AP002884.5-201ENST00000595053 1132 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 ELOCP34-201ENST00000604436 327 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL592221.1-201ENST00000605266 382 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC069545.1-201ENST00000605671 358 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 SNORA74.4-201ENST00000607595 199 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC099676.1-201ENST00000608886 657 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC079395.2-201ENST00000610982 737 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC005899.7-201ENST00000618199 588 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC104985.2-201ENST00000620598 500 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC010325.3-201ENST00000641084 394 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AP001541.1-201ENST00000623322 1904 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AOX3P-204ENST00000491025 2107 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 CASC19-246ENST00000641625 1606 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 OR4G2P-201ENST00000328113 903 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 PSMA6P1-201ENST00000400275 741 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 RNA5SP80-201ENST00000410475 111 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 MTCO1P3-201ENST00000429327 192 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 GAPDHP59-201ENST00000435908 267 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC091862.1-201ENST00000438016 1100 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 BX679664.2-201ENST00000439282 283 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 AC079776.3-201ENST00000450665 370 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 OR6C5P-201ENST00000452388 923 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 MTND2P24-201ENST00000453434 806 ntBASIC5.55□□□□□ -1.52
SEC61A2Q9H9S3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms