Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 MRPL35P2-201ENST00000448009 511 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 PRPF38AP1-201ENST00000451976 933 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 snoU13.22-201ENST00000459428 104 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 DEFB109A-201ENST00000482450 265 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 ENPP7P11-201ENST00000505915 627 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 SNORA31.9-201ENST00000516429 84 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AC022916.3-201ENST00000592961 742 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 SNORA5.1-201ENST00000384275 131 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 RPL12P9-201ENST00000412942 488 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 TMSB10P2-201ENST00000416049 131 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AL451062.2-201ENST00000427515 271 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 RPS3AP54-201ENST00000435535 734 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 RN7SL810P-201ENST00000493031 276 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 Y_RNA.719-201ENST00000517156 106 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 SNX18P1Y-201ENST00000616231 511 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 NCOA4P2-201ENST00000340589 1813 ntBASIC7.09□□□□□ -1.27
SCAPERQ9BY12 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 AC009643.2-201ENST00000603543 1448 ntBASIC7.09□□□□□ -1.27
SCAPERQ9BY12 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCAPERQ9BY12 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 LINC01881-201ENST00000416103 412 ntBASIC7.09□□□□□ -1.28
SCAPERQ9BY12 BX119904.3-201ENST00000428194 957 ntBASIC7.09□□□□□ -1.28
SCAPERQ9BY12 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 RPS27AP16-201ENST00000492222 470 ntBASIC7.09□□□□□ -1.28
SCAPERQ9BY12 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 AP003730.1-201ENST00000524605 285 ntBASIC7.09□□□□□ -1.28
SCAPERQ9BY12 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 MIR492-201ENST00000638676 116 ntBASIC7.09□□□□□ -1.28
SCAPERQ9BY12 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SCAPERQ9BY12 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 RNU1-94P-201ENST00000362627 173 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 RPL23AP26-201ENST00000412728 464 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 AC011933.1-201ENST00000413334 321 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 CEACAMP8-201ENST00000413902 580 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 AC116533.1-201ENST00000459748 321 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 AC104763.1-201ENST00000475274 360 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 PSMB7P1-201ENST00000556349 514 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 OR7A19P-201ENST00000608051 733 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 BX005214.3-202ENST00000619809 325 ntBASIC7.08□□□□□ -1.28
SCAPERQ9BY12 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SCAPERQ9BY12 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCAPERQ9BY12 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms