Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC096553.1-201ENST00000605169 829 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AL121873.1-201ENST00000616013 524 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC003001.2-201ENST00000616294 831 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC012414.7-202ENST00000622705 1090 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 DDX18P3-201ENST00000404856 2007 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC114878.1-201ENST00000441166 358 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 TDGF1P1-201ENST00000445734 527 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AL500527.1-201ENST00000448532 255 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 TCEA1P1-201ENST00000449716 880 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 RN7SL547P-201ENST00000490793 290 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 RPL37P23-201ENST00000492641 294 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 PPM1AP1-201ENST00000502740 1135 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC112191.2-201ENST00000522428 333 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 MIR4675-201ENST00000577898 77 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 OR1AB1P-201ENST00000585564 761 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AL669942.2-201ENST00000620352 697 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 AC073592.7-201ENST00000623659 507 ntBASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC28BQ9BUN5 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RN7SKP187-201ENST00000365536 330 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RNU6-729P-201ENST00000384399 107 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AL645733.1-201ENST00000402250 217 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RNU6-564P-201ENST00000410983 104 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 VN1R37P-201ENST00000419096 748 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RPL12P43-201ENST00000420608 499 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC093414.1-201ENST00000434712 514 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 MAPRE1P3-201ENST00000435438 796 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RPL23AP19-201ENST00000436229 369 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 HMGN1P36-201ENST00000446623 298 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 KNOP1P3-201ENST00000446933 426 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC017099.1-201ENST00000448261 1028 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC104306.1-201ENST00000449702 371 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 IGHV5-78-201ENST00000450948 295 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RPS27AP2-201ENST00000457576 465 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC104849.1-201ENST00000462623 405 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RPS21P4-201ENST00000487122 248 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RFPL4AP3-201ENST00000515267 345 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC022826.1-201ENST00000519383 805 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AL121834.1-201ENST00000572284 509 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 MIR4271-201ENST00000582451 67 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC104695.2-201ENST00000605056 775 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AC009779.8-202ENST00000607990 932 ntBASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC28BQ9BUN5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms