Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC110373.1-201ENST00000505994 3505 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 RNU1-150P-201ENST00000362491 162 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 CRP-204ENST00000368112 787 ntTSL 2 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL121977.1-201ENST00000401636 979 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 BTF3P7-201ENST00000407097 488 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 BX284632.2-201ENST00000421091 399 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL035660.1-201ENST00000422041 222 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL512605.1-202ENST00000441919 381 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL359955.2-201ENST00000445380 353 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL050341.1-201ENST00000447743 313 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 RN7SL799P-201ENST00000475891 298 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC126182.1-201ENST00000478134 357 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 RN7SL817P-201ENST00000480777 288 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC109471.1-201ENST00000511631 612 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 SNORA31.13-201ENST00000516624 135 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AP000648.1-201ENST00000529682 397 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC079600.1-201ENST00000550326 297 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 SERPINE4P-201ENST00000554978 281 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC092325.1-201ENST00000566449 554 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 MRO-208ENST00000588444 866 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 LAPTM4BP2-201ENST00000604542 446 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL021368.3-201ENST00000607119 578 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC006924.1-201ENST00000610750 559 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC025253.1-201ENST00000613623 543 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC013476.2-201ENST00000614456 459 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 TCL6_3.1-201ENST00000619064 137 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 MIR4278-201ENST00000636094 69 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC127502.3-201ENST00000636170 1206 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AF287957.1-201ENST00000607368 1595 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 TTC39DP-201ENST00000416781 1688 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC015689.2-201ENST00000528172 1738 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 RBPJP7-201ENST00000442803 1447 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 RBPJP5-201ENST00000449433 1447 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC119674.1-213ENST00000641177 1386 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 TMSB4XP2-201ENST00000335179 210 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 RNA5SP27-201ENST00000363839 119 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC241584.1-201ENST00000438469 1241 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC023271.1-201ENST00000445936 1090 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 HMGN1P36-201ENST00000446623 298 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC092967.1-201ENST00000449016 481 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AP006222.1-205ENST00000450734 457 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 MTND2P24-201ENST00000453434 806 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 SNRPGP9-201ENST00000456025 225 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 RNU7-140P-201ENST00000459546 60 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 RPL7P18-201ENST00000478965 734 ntBASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNGAP1Q96PV0 AC104090.1-201ENST00000506341 1171 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms