Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC093414.1-201ENST00000434712 514 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AL450023.3-201ENST00000440592 271 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 HMGB1P4-201ENST00000455362 567 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 RPS21P4-201ENST00000487122 248 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 snoU109.6-201ENST00000516831 118 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 RN7SKP260-201ENST00000516907 149 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC012339.2-201ENST00000523996 453 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC069307.1-201ENST00000602820 447 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 SUGT1P3-202ENST00000604259 383 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 MIR6889-201ENST00000613185 59 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AL672167.1-203ENST00000641299 2975 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 AC235565.1-201ENST00000456962 1325 ntBASIC3.6□□□□□ -1.83
AP1S3Q96PC3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S3Q96PC3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RNA5SP510-201ENST00000364697 99 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 OR7E156P-201ENST00000400303 464 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AL390774.1-201ENST00000411924 246 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 DYNLL1P7-201ENST00000429273 258 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPS27P18-201ENST00000431701 247 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 CYCSP12-201ENST00000437729 300 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AL353748.1-201ENST00000440753 474 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPL36AP39-201ENST00000445859 318 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AL451050.1-201ENST00000450126 415 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 OR52E7P-201ENST00000452394 933 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPS17P2-201ENST00000461663 408 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPSAP39-201ENST00000467439 883 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC094085.1-201ENST00000468914 584 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPL35AP19-201ENST00000469425 329 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC007998.1-201ENST00000474156 672 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPL23AP65-201ENST00000475608 468 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC012158.1-204ENST00000483430 465 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC104971.1-201ENST00000495117 578 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RPS4XP18-201ENST00000495480 763 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AL136038.1-201ENST00000497246 351 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC010350.1-201ENST00000504908 231 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 RNA5SP497-201ENST00000516081 97 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 VTA1P2-201ENST00000520205 911 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC068790.5-201ENST00000602741 355 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC023813.4-201ENST00000607580 580 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.59□□□□□ -1.83
AP1S3Q96PC3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.59□□□□□ -1.83
AP1S3Q96PC3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
AP1S3Q96PC3 ECM1P2-201ENST00000503354 1577 ntBASIC3.59□□□□□ -1.84
AP1S3Q96PC3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms