Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL21A1Q96P44 CASC19-204ENST00000641001 2055 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL21A1Q96P44 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 RNA5SP123-201ENST00000363244 119 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AL589647.1-201ENST00000402485 466 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 AL589994.1-201ENST00000404962 340 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 RN7SKP247-201ENST00000411094 308 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 PTP4A1P1-201ENST00000420539 515 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 NIPA2P1-201ENST00000426223 976 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 TRGV7-201ENST00000427089 353 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 RPS26P2-201ENST00000440331 348 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 SNRPFP2-201ENST00000440710 251 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 RN7SL610P-201ENST00000463845 291 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC016687.1-201ENST00000482574 353 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC008410.1-201ENST00000483777 339 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL21A1Q96P44 HMGB1P19-201ENST00000517578 577 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC026688.1-201ENST00000520639 1168 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 MIR4646-201ENST00000580775 63 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC011487.3-201ENST00000593607 453 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 IMMP1LP1-201ENST00000605170 488 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL21A1Q96P44 AC087821.1-201ENST00000623639 567 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 CASC19-222ENST00000641321 1173 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 AL672167.1-205ENST00000641112 3080 ntBASIC4.57□□□□□ -1.68
COL21A1Q96P44 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.57□□□□□ -1.68
COL21A1Q96P44 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL21A1Q96P44 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 INTS6P1-201ENST00000504674 2530 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC123912.3-201ENST00000600907 1367 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL645733.1-201ENST00000402250 217 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 CHEK2P3-201ENST00000416118 248 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 RGS17P1-201ENST00000423358 553 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 EIF4HP2-201ENST00000424380 563 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL138787.1-202ENST00000437804 898 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 THAP12P8-201ENST00000447914 2115 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 TRY2P-201ENST00000448860 689 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC022795.1-201ENST00000473808 480 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 RPL21P6-201ENST00000479171 504 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 Y_RNA.719-201ENST00000517156 106 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AP000676.2-201ENST00000529711 301 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 RN7SL52P-201ENST00000584271 284 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC012414.7-202ENST00000622705 1090 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC112694.2-201ENST00000623697 768 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL353662.3-201ENST00000625131 237 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL596275.2-204ENST00000641628 552 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL596275.2-206ENST00000641957 626 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL359922.3-201ENST00000624779 1670 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AL034370.1-201ENST00000397254 1590 ntBASIC4.56□□□□□ -1.68
COL21A1Q96P44 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms