Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MTND2P2-201ENST00000434633 945 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AL137845.2-201ENST00000444292 988 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC000111.2-201ENST00000448200 210 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 NDUFA5P8-201ENST00000449019 346 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC090114.3-201ENST00000479267 829 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC079841.1-201ENST00000481228 950 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC106872.4-201ENST00000510050 523 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MIR4489-201ENST00000578869 62 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MIR4691-201ENST00000583764 85 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MIR4302-201ENST00000638058 60 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AP000756.2-201ENST00000624168 2567 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 CASC19-206ENST00000641028 1430 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 MIR365B-201ENST00000362317 111 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 RNA5SP105-201ENST00000391123 113 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 U3.36-201ENST00000408418 213 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 RNU6-233P-201ENST00000410845 141 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 Z68694.1-201ENST00000413929 841 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 RAB9AP4-201ENST00000415230 609 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 RPL12P43-201ENST00000420608 499 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC079355.1-201ENST00000421770 223 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 RN7SL517P-201ENST00000462240 305 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AL591473.1-201ENST00000464297 313 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC022795.1-201ENST00000473808 480 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 BX284632.1-201ENST00000478218 541 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC037198.2-201ENST00000478845 733 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 RN7SL244P-201ENST00000493405 297 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 MTCYBP19-201ENST00000517463 1124 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC025423.2-201ENST00000537570 439 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC068446.3-201ENST00000555285 382 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AP005119.2-201ENST00000579735 1105 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 MIR1269B-201ENST00000580405 75 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 MIR8069-1-201ENST00000616627 86 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 MIR8069-2-201ENST00000621412 86 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC015804.1-201ENST00000622935 435 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 AC074029.4-201ENST00000624796 1859 ntBASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLHC1Q8NHS4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms