Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RPL21P131-201ENST00000497298 483 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC021106.1-201ENST00000509020 1058 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC119751.5-201ENST00000514077 770 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 OR5D2P-201ENST00000524390 911 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 OR7E128P-201ENST00000532736 1024 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 MRPS36P5-201ENST00000551909 298 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC126615.2-201ENST00000553003 515 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 CCDC58P3-201ENST00000590792 430 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AL021368.3-201ENST00000607119 578 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC006338.2-201ENST00000616864 791 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC006386.1-201ENST00000619436 415 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC011330.2-201ENST00000621680 635 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 RPL18P10-201ENST00000425606 538 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 SETP8-201ENST00000435341 628 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 SNRPFP2-201ENST00000440710 251 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 OR10R1P-201ENST00000441524 1141 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 RPS4XP6-201ENST00000477670 797 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 GOLGA5P1-201ENST00000507317 980 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC108120.2-201ENST00000512973 294 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 EIF3KP3-201ENST00000514461 639 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AP006289.1-201ENST00000538089 277 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 MIR5096-201ENST00000583713 70 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 DUXAP3-201ENST00000603616 594 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 HIRAP1-201ENST00000605318 787 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 PART1_2.1-201ENST00000612397 250 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC112694.2-201ENST00000623697 768 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC009039.2-201ENST00000624524 529 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AC017104.5-201ENST00000637647 639 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 AP002512.4-202ENST00000641599 4530 ntBASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SMC1BQ8NDV3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC119674.1-213ENST00000641177 1386 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AL355578.1-201ENST00000607405 1328 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 OR55B1P-203ENST00000641518 2602 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC079741.1-201ENST00000321498 212 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 SNORD8-201ENST00000363915 110 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 SNORA48.7-201ENST00000391302 135 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AL078599.1-201ENST00000402075 293 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 RPL7P27-201ENST00000403775 720 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 USP9YP21-201ENST00000420603 432 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 GTF2IP2-201ENST00000424290 697 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms