Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL512310.9-201ENST00000553311 948 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AL132857.1-201ENST00000555180 708 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 RN7SL356P-201ENST00000582228 248 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC009027.1-201ENST00000604510 479 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 Z99289.3-201ENST00000605586 594 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AL157392.4-201ENST00000609756 345 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 MUC2-202ENST00000613187 4845 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 SOCS5P3-201ENST00000425115 1576 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 CR788268.1-201ENST00000603931 1809 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC116158.1-201ENST00000560231 2129 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RNU1-19P-201ENST00000363306 165 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL672167.2-201ENST00000377164 879 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 TAS2R15P-201ENST00000390674 928 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RPL21P67-201ENST00000402896 478 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL133388.1-201ENST00000404509 287 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AP002530.1-201ENST00000405705 684 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 ZNF602P-201ENST00000405929 924 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 OR4K12P-201ENST00000406538 961 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SNORA79B-201ENST00000410557 148 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 OR51B3P-201ENST00000412287 913 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RPL12P9-201ENST00000412942 488 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 Z93019.1-201ENST00000416450 973 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 MTND2P5-201ENST00000432656 1006 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL035246.1-201ENST00000433554 1255 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL138787.1-202ENST00000437804 898 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 EIF2S2P2-201ENST00000447161 982 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC105399.1-202ENST00000447303 205 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 OR52E7P-201ENST00000452394 933 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC096992.1-201ENST00000459808 709 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AP000942.1-201ENST00000463969 747 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC117394.1-201ENST00000477323 567 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC020779.1-201ENST00000478757 796 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 RPS12P31-201ENST00000491419 398 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC016559.2-201ENST00000510759 359 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC098976.1-201ENST00000513014 541 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC119751.5-201ENST00000514077 770 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC027369.5-201ENST00000533838 755 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 MIR1273E-201ENST00000581165 102 ntBASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP4Q8N3C7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms