Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 NXF4-202ENST00000416098 1465 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL121950.1-201ENST00000624993 2077 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 OR56B2P-201ENST00000317102 954 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 MIR323A-201ENST00000362199 86 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 RN7SKP224-201ENST00000364140 325 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 RN7SKP15-201ENST00000364742 309 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 HMGB3P7-201ENST00000400214 611 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 ARL4AP5-201ENST00000404372 599 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 RPL35AP24-201ENST00000413846 330 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AF186996.5-201ENST00000418098 904 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 OR2AM1P-201ENST00000422137 422 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC104843.2-201ENST00000427666 297 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 RPL12P11-201ENST00000439970 501 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 RPS6P2-201ENST00000454208 705 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 SETP20-201ENST00000457046 852 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC116562.1-201ENST00000485355 781 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 NIP7P2-201ENST00000485801 544 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AP000926.3-201ENST00000497201 299 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 CYCSP28-201ENST00000534284 321 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC093249.4-201ENST00000564755 259 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AL359757.1-201ENST00000623176 255 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AP003499.2-201ENST00000624100 483 ntBASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUDCD3Q8IVD9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 RNU1-20P-201ENST00000363314 162 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 RN7SKP59-201ENST00000410520 314 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 VDAC1P9-201ENST00000412766 841 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 MTCO1P51-201ENST00000427672 1060 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 RPS17P8-201ENST00000434525 335 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 RN7SL717P-201ENST00000478343 297 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 RPS4XP1-201ENST00000482189 787 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 RPL7P51-201ENST00000490532 749 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC011270.1-201ENST00000558606 583 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 FKBP1AP1-201ENST00000594588 318 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC233280.2-201ENST00000603917 1070 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AL121932.1-201ENST00000605542 214 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC026979.4-201ENST00000606555 645 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC004477.3-201ENST00000614061 590 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AL353662.3-201ENST00000625131 237 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 AL136164.3-201ENST00000624429 3978 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 KARSP1-201ENST00000451871 1752 ntBASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUDCD3Q8IVD9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AP001002.1-201ENST00000625148 1513 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 HSPD1P14-201ENST00000432666 1618 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms