Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC022884.2-201ENST00000578535 580 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC005520.3-201ENST00000602874 370 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC005252.1-201ENST00000604518 1063 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC011626.1-201ENST00000604710 562 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC025175.1-201ENST00000606482 759 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC090510.2-201ENST00000617465 629 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AP002967.1-201ENST00000624203 539 ntBASIC5.37□□□□□ -1.55
PRPF39Q86UA1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
PRPF39Q86UA1 HSPA8P18-201ENST00000439846 1928 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC114947.2-201ENST00000565748 2125 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AL645733.1-201ENST00000402250 217 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 RN7SKP125-201ENST00000410481 302 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 CTSL3P-202ENST00000412179 788 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC048351.1-201ENST00000420064 602 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 MTATP6P11-201ENST00000428071 670 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AL160175.1-201ENST00000428124 247 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC079168.1-201ENST00000458741 345 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 SYT14P1-201ENST00000481459 721 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 RPS24P16-201ENST00000497294 392 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 NPM1P47-201ENST00000560843 856 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC233266.2-201ENST00000567067 528 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 CBX3P2-202ENST00000583365 535 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC006116.3-201ENST00000592968 361 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 TAS2R6P-201ENST00000605022 826 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC073137.1-201ENST00000605636 634 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC011472.4-201ENST00000615848 491 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AP002799.1-201ENST00000623552 423 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 AC004817.4-201ENST00000602396 3625 ntBASIC5.36□□□□□ -1.55
PRPF39Q86UA1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF39Q86UA1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC131971.1-201ENST00000332881 1482 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 SNORA17.1-201ENST00000362945 126 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 RNU4-31P-201ENST00000384211 141 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 MIR105-1-201ENST00000385222 81 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AL589647.1-201ENST00000402485 466 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AL133270.1-201ENST00000402635 279 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 U3.36-201ENST00000408418 213 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 RNU2-50P-201ENST00000410494 143 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC093162.1-201ENST00000419682 124 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms