Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 OR2B7P-201ENST00000429302 934 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AL031584.1-201ENST00000447169 754 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC093166.2-201ENST00000455969 1017 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AP002371.1-201ENST00000463604 433 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 RFPL4AP3-201ENST00000515267 345 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 SNORD116-30-201ENST00000516468 85 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC026688.1-201ENST00000520639 1168 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC008126.1-201ENST00000549019 480 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 MIR3667-201ENST00000581025 74 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 MIR4737-201ENST00000583979 81 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC104687.2-201ENST00000604442 342 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 AC107308.1-201ENST00000615897 301 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 MIR8069-1-201ENST00000616627 86 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 MIR8069-2-201ENST00000621412 86 ntBASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFWD3Q6PCD5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 CASC19-255ENST00000641733 1385 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 Z95331.1-201ENST00000623075 23112 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 RNA5SP87-201ENST00000384155 118 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 RNA5SP113-201ENST00000410486 84 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 SETP15-201ENST00000412724 337 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC007559.1-201ENST00000428736 355 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 SLC25A18P1-201ENST00000449385 454 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AURKAPS2-201ENST00000454983 333 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC104849.1-201ENST00000462623 405 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 NPM1P29-201ENST00000483112 803 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 RPS23P1-201ENST00000491662 432 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC113398.2-201ENST00000507630 558 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AP001880.2-201ENST00000538233 448 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 EIF1AXP2-201ENST00000555940 413 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AL049839.1-201ENST00000556151 657 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC116553.2-201ENST00000564203 463 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 MIR4700-201ENST00000578311 74 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 AC087468.1-201ENST00000604365 630 ntBASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RFWD3Q6PCD5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AC021242.1-201ENST00000507315 2035 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AL356968.2-201ENST00000412769 1257 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 OR1H1P-201ENST00000448731 937 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AL591623.2-201ENST00000449978 222 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 RBMY2TP-201ENST00000451162 947 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AC112206.1-201ENST00000468416 477 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 OR2A3P-201ENST00000493774 953 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 UBE2FP2-201ENST00000566646 462 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 DPRXP4-201ENST00000578053 568 ntBASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.03□□□□□ -1.6
RFWD3Q6PCD5 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms