Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL445669.2-201ENST00000454425 421 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 RN7SL174P-201ENST00000475578 289 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 SIAH1P1-201ENST00000479411 923 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 RPS4XP1-201ENST00000482189 787 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 RN7SL101P-201ENST00000496350 279 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC097173.1-201ENST00000505862 819 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 SUMO2P5-201ENST00000506790 245 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 MTCO3P28-201ENST00000513351 515 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC012400.1-201ENST00000518452 381 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC027026.1-201ENST00000532323 742 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC023825.1-201ENST00000566704 1030 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC012146.2-201ENST00000576545 416 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AL160237.3-201ENST00000604114 1013 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC090527.3-201ENST00000619041 548 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC004943.3-201ENST00000624116 600 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 MIR4302-201ENST00000638058 60 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 MFSD8-220ENST00000641243 1422 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 CDY11P-201ENST00000447168 1651 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 RN7SKP160-201ENST00000363804 340 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 SNORA67-201ENST00000384423 137 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 NUDT19P3-201ENST00000404698 555 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC108075.1-201ENST00000424692 529 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AL035246.1-201ENST00000433554 1255 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 RPS29P10-201ENST00000439197 166 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 SPRYD7P1-201ENST00000443861 570 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 PPIAP20-201ENST00000449839 135 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 Z92846.1-201ENST00000456203 268 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC020779.1-201ENST00000478757 796 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 OR4U1P-201ENST00000554958 912 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC006349.1-201ENST00000555526 235 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms