Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AP000936.3-201ENST00000438127 255 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 OR52E3P-201ENST00000452083 936 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 RPS4XP12-201ENST00000461747 709 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC009127.1-201ENST00000467090 155 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 RPS18P6-201ENST00000476880 458 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 NPM1P29-201ENST00000483112 803 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC107398.1-201ENST00000486904 505 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 VTA1P2-201ENST00000520205 911 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 OR8A2P-201ENST00000528631 952 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC127024.5-201ENST00000580085 462 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AL445222.1-201ENST00000607259 628 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AP001033.2-201ENST00000609701 1003 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC009163.6-201ENST00000612367 342 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 CASC19-222ENST00000641321 1173 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 AC025574.1-201ENST00000554784 1653 ntBASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX30Q5VWJ9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC133552.1-201ENST00000569988 4007 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 RNA5SP296-201ENST00000410523 111 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 RN7SKP222-201ENST00000410651 315 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 NPM1P40-201ENST00000412758 733 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 EI24P4-201ENST00000423683 1078 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 HMGB1P5-202ENST00000451497 985 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC078857.1-201ENST00000469870 667 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 RPL7AP6-201ENST00000477943 801 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC231760.1-201ENST00000498002 260 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC006427.1-201ENST00000514359 712 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 RNU6-1004P-201ENST00000516584 111 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC012400.1-201ENST00000518452 381 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 CR383656.14-201ENST00000551951 406 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 DPRXP4-201ENST00000578053 568 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 MIR3691-201ENST00000578066 90 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 RN7SL708P-201ENST00000580952 299 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 MIR4472-2-201ENST00000582069 67 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC098483.2-201ENST00000603158 454 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC087763.1-201ENST00000603391 286 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC008814.1-201ENST00000603797 406 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC009597.2-201ENST00000604659 592 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AP002799.1-201ENST00000623552 423 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 FRG1DP-201ENST00000635586 771 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC135068.12-201ENST00000637370 931 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC104260.2-201ENST00000623551 3497 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX30Q5VWJ9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SNX30Q5VWJ9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX30Q5VWJ9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX30Q5VWJ9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms