Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC114786.1-201ENST00000512892 1415 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AL157777.2-201ENST00000258070 137 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RNU6-1085P-201ENST00000363576 107 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RNA5SP514-201ENST00000363717 111 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RNA5SP118-201ENST00000410385 109 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RN7SKP140-201ENST00000411196 284 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AL672138.1-201ENST00000450604 1015 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RNU7-140P-201ENST00000459546 60 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RNU6-1208P-201ENST00000459588 107 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC010655.3-201ENST00000478818 450 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 GM2AP2-201ENST00000491764 562 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RNA5SP271-201ENST00000516700 88 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AP005902.1-201ENST00000521358 186 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC239860.2-201ENST00000525886 270 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AP005639.1-201ENST00000526939 192 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AP002748.2-201ENST00000528671 348 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AP000889.1-201ENST00000530968 660 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 PSMB7P1-201ENST00000556349 514 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC010547.6-201ENST00000571789 193 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC020914.7-201ENST00000594477 545 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC008638.3-201ENST00000603341 463 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 CR382285.1-202ENST00000604687 547 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC005084.1-201ENST00000605160 304 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 CTHRC1P1-201ENST00000605383 469 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AL355333.1-201ENST00000605632 279 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 MIR6811-201ENST00000620409 58 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 C2orf27A-204ENST00000623058 969 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AC009948.5-201ENST00000624360 4406 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 CDY7P-201ENST00000429883 1604 ntBASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RSPO4Q2I0M5 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 AL355974.1-201ENST00000618896 1708 ntBASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 MIR369-201ENST00000362155 70 ntBASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 AL359694.1-201ENST00000403247 604 ntBASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 MTCYBP36-201ENST00000404146 440 ntBASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 AC114482.1-201ENST00000418010 247 ntBASIC6.53□□□□□ -1.36
RSPO4Q2I0M5 AC019050.1-201ENST00000418508 492 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms