Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PCDH1Q08174 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PCDH1Q08174 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 IFIT1P1-201ENST00000400497 1449 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC117529.2-201ENST00000512159 2068 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDH1Q08174 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 RNU6-462P-201ENST00000362659 105 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RNU6-582P-201ENST00000362989 107 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 Y_RNA.89-201ENST00000363031 102 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RNU6-492P-201ENST00000363035 104 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 Y_RNA.97-201ENST00000363094 102 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 Y_RNA.263-201ENST00000364659 114 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 SNORA62.2-201ENST00000364672 152 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RNU6-534P-201ENST00000364877 106 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RN7SKP189-201ENST00000365042 330 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 MIR27A-201ENST00000385073 78 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RNA5SP35-201ENST00000391257 129 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 CYCSP52-201ENST00000422857 310 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDH1Q08174 RPL37P21-201ENST00000435890 276 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 MRPS21P3-201ENST00000436696 262 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AL451074.3-201ENST00000437709 472 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 UBE2V1P5-201ENST00000440070 405 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AL845321.1-201ENST00000444603 348 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDH1Q08174 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 RPL18AP17-201ENST00000455326 198 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDH1Q08174 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 HMGN1P10-201ENST00000474557 553 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDH1Q08174 RNA5SP216-201ENST00000516111 123 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 SCARNA15.1-201ENST00000516384 125 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RNU6-1261P-201ENST00000517194 104 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC140063.1-201ENST00000541343 259 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDH1Q08174 MIR5697-201ENST00000578045 78 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC091488.1-201ENST00000604239 660 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AC115286.1-201ENST00000604298 434 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 MEMO1P5-201ENST00000604810 406 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AL354718.1-201ENST00000619764 589 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDH1Q08174 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC009120.2-204ENST00000621548 2032 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDH1Q08174 AC025809.2-201ENST00000625085 1802 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDH1Q08174 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.5□□□□□ -1.37
PCDH1Q08174 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 SNX18P3-202ENST00000565670 1750 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms