Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC000095.2-202ENST00000637415 154 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 ADAM24P-201ENST00000398655 2101 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 RAB9AP3-201ENST00000412737 573 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 SYF2P2-201ENST00000417620 583 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AC140479.3-201ENST00000418944 1126 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC073052.1-201ENST00000440417 714 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 NOTCH2P1-201ENST00000443481 624 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 RAB9AP1-201ENST00000449393 573 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 SETP6-201ENST00000479329 568 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 RNA5SP519-201ENST00000516480 119 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC2.78□□□□□ -1.96
HSPG2P98160 IGKV2OR2-2-201ENST00000605025 300 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AC018695.5-201ENST00000605872 315 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 OR4K6P-201ENST00000416478 897 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC2.78□□□□□ -1.96
HSPG2P98160 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC2.78□□□□□ -1.96
HSPG2P98160 MRPL48P1-201ENST00000445390 636 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AC104978.1-201ENST00000449387 391 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 PPIAP3-201ENST00000450588 505 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 PPIAP15-201ENST00000479662 484 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 TRIM36-IT1-201ENST00000503723 881 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC107982.3-201ENST00000584957 985 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC079880.2-201ENST00000603790 1213 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HSPG2P98160 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HSPG2P98160 RPL12P9-201ENST00000412942 488 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC2.78□□□□□ -1.96
HSPG2P98160 AK4P6-201ENST00000505168 528 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC2.78□□□□□ -1.96
HSPG2P98160 AL138721.1-201ENST00000616756 179 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 MIR6500-201ENST00000622700 86 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 AC008124.1-201ENST00000609803 9730 ntBASIC2.78□□□□□ -1.96
HSPG2P98160 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HSPG2P98160 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HSPG2P98160 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
HSPG2P98160 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HSPG2P98160 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 OR52E6-202ENST00000379946 954 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 AC099670.2-201ENST00000435130 321 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC2.77□□□□□ -1.97
HSPG2P98160 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.77□□□□□ -1.97
HSPG2P98160 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC2.77□□□□□ -1.97
HSPG2P98160 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AC092451.3-201ENST00000625067 1343 ntBASIC2.77□□□□□ -1.97
HSPG2P98160 TEK-205ENST00000615002 4666 ntTSL 5 BASIC2.77□□□□□ -1.97
HSPG2P98160 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HSPG2P98160 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms