Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PIGPP4-201ENST00000584447 307 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AC009220.3-201ENST00000604318 586 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AC121247.2-201ENST00000604776 136 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AL591167.1-201ENST00000607321 456 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AL451074.6-201ENST00000608512 729 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AL512624.1-201ENST00000613638 469 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AC024255.1-201ENST00000614376 102 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AC245014.3-201ENST00000618589 347 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX6-1P78426 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
NKX6-1P78426 MIR4278-201ENST00000636094 69 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX6-1P78426 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NKX6-1P78426 MIR193BHG-214ENST00000641765 509 ntBASIC5.39□□□□□ -1.55
NKX6-1P78426 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX6-1P78426 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX6-1P78426 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX6-1P78426 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NKX6-1P78426 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX6-1P78426 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX6-1P78426 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX6-1P78426 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NKX6-1P78426 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC011369.2-201ENST00000624423 1567 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NKX6-1P78426 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC020633.1-201ENST00000468439 2247 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 RNA5SP242-201ENST00000364171 118 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NKX6-1P78426 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC234782.4-201ENST00000417646 1048 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AL365203.2-201ENST00000423444 196 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 DYNLL1P7-201ENST00000429273 258 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 TUBB4BP6-201ENST00000437576 479 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 PPIAP10-201ENST00000438675 458 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 BX679664.2-201ENST00000439282 283 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 TXNP5-201ENST00000441043 315 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC092967.1-201ENST00000449016 481 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC104306.1-201ENST00000449702 371 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 CFL1P4-201ENST00000451536 498 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AL354710.1-201ENST00000453641 246 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 VPS25P1-201ENST00000455691 508 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 RPL5P24-201ENST00000463742 885 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.38□□□□□ -1.55
NKX6-1P78426 RN7SL717P-201ENST00000478343 297 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 RPL7P6-201ENST00000480903 738 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 RN7SL273P-201ENST00000481561 299 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC126121.1-201ENST00000482313 553 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 LINC00888-204ENST00000487386 421 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC109445.1-201ENST00000512356 383 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AL356057.1-201ENST00000533798 831 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.38□□□□□ -1.55
NKX6-1P78426 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 VN1R82P-201ENST00000601481 356 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AL390838.2-201ENST00000602394 274 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AP001823.1-201ENST00000604056 1003 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX6-1P78426 AC023813.4-201ENST00000607580 580 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AP004247.3-201ENST00000608682 624 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC006924.1-201ENST00000610750 559 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC100847.1-201ENST00000611316 481 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 AC108359.1-201ENST00000616451 1211 ntBASIC5.38□□□□□ -1.55
NKX6-1P78426 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX6-1P78426 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX6-1P78426 AL049767.1-202ENST00000637826 242 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms