Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 HIGD1AP10-201ENST00000527837 282 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC005832.3-201ENST00000537929 631 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 POLR2KP1-201ENST00000553226 168 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC008759.1-201ENST00000589783 983 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 VN1R88P-201ENST00000596787 292 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 WISP1-OT1-201ENST00000602893 642 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AC103881.1-201ENST00000603476 538 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 uc_338.31-201ENST00000615595 186 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AC096861.1-201ENST00000616652 240 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 MIR6721-201ENST00000617181 87 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AC241377.1-201ENST00000619797 406 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC099654.15-201ENST00000639802 509 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 DCAF13P3-201ENST00000561147 1334 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 SNX18P3-202ENST00000565670 1750 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC116158.1-201ENST00000560231 2129 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 AC004656.1-201ENST00000568479 4951 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.35□□□□□ -1.55
CLRN1P58418 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 MAPK10-261ENST00000641050 3109 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 MTND5P29-201ENST00000458676 1807 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC073429.2-201ENST00000569694 1444 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 SAMMSON-210ENST00000641260 1308 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 RNA5SP232-201ENST00000364144 119 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 SNORA62.2-201ENST00000364672 152 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 RNA5SP279-201ENST00000365513 117 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 MIR1303-201ENST00000408625 86 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 RN7SKP86-201ENST00000410454 332 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AF274854.1-201ENST00000413236 615 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC004022.2-201ENST00000413824 193 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.35□□□□□ -1.55
CLRN1P58418 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 GAPDHP49-201ENST00000421421 961 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 SETP9-201ENST00000423837 832 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 DPRXP1-201ENST00000426312 460 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 HMGB3P10-201ENST00000434734 572 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 H3F3BP1-201ENST00000440551 403 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.35□□□□□ -1.55
CLRN1P58418 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 PPIAP7-201ENST00000454070 489 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 RFC5P1-201ENST00000454419 874 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 RPL7P1-201ENST00000468161 747 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 RPL7P9-201ENST00000468715 747 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 SETP11-201ENST00000473027 690 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC106822.1-201ENST00000502647 526 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.35□□□□□ -1.55
CLRN1P58418 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 RPL7L1P4-201ENST00000513004 707 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 RNU2-30P-201ENST00000516209 141 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 RNU6-678P-201ENST00000516832 109 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC087808.1-201ENST00000520501 361 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 AP000620.1-201ENST00000527147 504 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 HNRNPCP1-201ENST00000556181 766 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AL049779.3-201ENST00000557141 606 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms