Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA1P56159 MIR5095-201ENST00000578844 88 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 MIR548AB-201ENST00000584917 84 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.82□□□□□ -1.48
GFRA1P56159 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 AL606834.2-201ENST00000602954 668 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC005084.1-201ENST00000605160 304 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC007684.1-201ENST00000609671 477 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AL356596.1-201ENST00000624230 379 ntBASIC5.82□□□□□ -1.48
GFRA1P56159 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
GFRA1P56159 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA1P56159 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
GFRA1P56159 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 UGT2B27P-201ENST00000505092 1620 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 WDR95P-201ENST00000425638 1542 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 RNU6-259P-201ENST00000383999 107 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 RNU6-348P-201ENST00000384386 107 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 RN7SKP86-201ENST00000410454 332 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 RNU2-18P-201ENST00000411224 162 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 OR8G2P-201ENST00000412796 908 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 RPS6P23-201ENST00000413224 722 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
GFRA1P56159 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 AC073335.1-201ENST00000427776 363 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC005033.1-201ENST00000428904 813 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 PMS2P9-201ENST00000441237 515 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 TIMM8BP2-201ENST00000445940 251 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC239367.2-201ENST00000447309 705 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 SLC31A1P1-201ENST00000451221 567 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 RPL37P3-201ENST00000456825 293 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 OR9M1P-201ENST00000459641 921 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 MARK2P8-201ENST00000476069 952 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC022206.1-201ENST00000495947 347 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 RN7SL649P-201ENST00000496974 275 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA1P56159 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA1P56159 AC025674.1-201ENST00000507074 324 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC109481.1-201ENST00000509173 282 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA1P56159 NRON-201ENST00000517270 370 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AC025881.1-201ENST00000518851 512 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AC024405.1-201ENST00000532521 1042 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 OR8G3P-201ENST00000533406 921 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.81□□□□□ -1.48
GFRA1P56159 TPRX1P1-201ENST00000557620 319 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 AGGF1P8-201ENST00000562979 1000 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC009063.1-201ENST00000563342 702 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AC090616.1-201ENST00000583895 447 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 AL589863.1-201ENST00000595383 631 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.81□□□□□ -1.48
GFRA1P56159 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 SEPT7P9-203ENST00000604116 343 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC073046.2-201ENST00000604756 527 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GFRA1P56159 MRPL57P1-201ENST00000621486 265 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.81□□□□□ -1.48
GFRA1P56159 AL603839.4-201ENST00000624658 1005 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 AC019226.1-201ENST00000625666 515 ntBASIC5.81□□□□□ -1.48
GFRA1P56159 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.81□□□□□ -1.48
GFRA1P56159 AC073869.7-201ENST00000640874 297 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms