Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
HMGCS2P54868 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HMGCS2P54868 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 TRIM51GP-201ENST00000534741 1350 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 AC025031.4-201ENST00000621248 3271 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS2P54868 RPL21P108-201ENST00000413857 481 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS2P54868 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS2P54868 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS2P54868 RPL23AP24-201ENST00000458203 385 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMGCS2P54868 AC135999.1-201ENST00000478962 479 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
HMGCS2P54868 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 AC010857.1-201ENST00000606398 594 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 AC012409.3-201ENST00000611343 981 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 AL035461.2-201ENST00000619201 524 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 AP005019.3-201ENST00000620418 560 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 NCOA4P2-201ENST00000340589 1813 ntBASIC5.45□□□□□ -1.54
HMGCS2P54868 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HMGCS2P54868 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS2P54868 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCS2P54868 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCS2P54868 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCS2P54868 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HMGCS2P54868 RPL21P67-201ENST00000402896 478 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 COX5BP7-201ENST00000414780 274 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 RPL7AP25-201ENST00000423357 805 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCS2P54868 RPS27AP6-201ENST00000427962 448 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 YWHAZP2-201ENST00000440317 728 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCS2P54868 FHP1-201ENST00000442741 703 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 MTCYBP21-201ENST00000443300 1113 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HMGCS2P54868 RPL21P126-201ENST00000470049 478 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 AC104763.1-201ENST00000475274 360 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCS2P54868 AC106806.2-201ENST00000509365 500 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 NPM1P21-201ENST00000513394 762 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 IGLVIV-65-201ENST00000517313 360 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCS2P54868 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS2P54868 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCS2P54868 AL109766.1-201ENST00000555080 552 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCS2P54868 AGGF1P9-201ENST00000561884 913 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS2P54868 SYT14P1-202ENST00000600441 1448 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS2P54868 AC091046.3-201ENST00000631455 1574 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 CASC19-260ENST00000641828 2001 ntBASIC5.44□□□□□ -1.54
HMGCS2P54868 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS2P54868 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS2P54868 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGCS2P54868 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCS2P54868 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 AC108467.2-201ENST00000617640 1597 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCS2P54868 AC021146.4-201ENST00000309229 279 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 MIR659-201ENST00000384963 97 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 AL590762.2-201ENST00000395798 571 ntBASIC5.43□□□□□ -1.54
HMGCS2P54868 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS2P54868 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS2P54868 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS2P54868 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS2P54868 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms