Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC053481.1-201ENST00000467217 306 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 DEFB109A-201ENST00000482450 265 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.54□□□□□ -1.36
CLTCL1P53675 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.54□□□□□ -1.36
CLTCL1P53675 AC084824.1-201ENST00000550917 1005 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.54□□□□□ -1.36
CLTCL1P53675 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.54□□□□□ -1.36
CLTCL1P53675 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 DNM1P47-203ENST00000571780 12667 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.54□□□□□ -1.36
CLTCL1P53675 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CLTCL1P53675 AC025031.4-201ENST00000621248 3271 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 UBBP2-201ENST00000376781 231 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 RNA5SP317-201ENST00000410176 116 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 RNA5SP311-201ENST00000411290 116 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 AC011933.1-201ENST00000413334 321 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 NPM1P26-201ENST00000426339 738 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 RPL23AP52-201ENST00000439311 478 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 AC116533.1-201ENST00000459748 321 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 RNA5SP315-201ENST00000516340 116 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 RNA5SP312-201ENST00000517068 116 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.54□□□□□ -1.36
CLTCL1P53675 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.54□□□□□ -1.36
CLTCL1P53675 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CLTCL1P53675 ARF4P1-201ENST00000605447 541 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 SNX18P1Y-201ENST00000616231 511 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 AC108467.2-201ENST00000617640 1597 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 AC140479.6-201ENST00000633535 357 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 CASC19-206ENST00000641028 1430 ntBASIC6.54□□□□□ -1.36
CLTCL1P53675 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.53□□□□□ -1.36
CLTCL1P53675 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CLTCL1P53675 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLTCL1P53675 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLTCL1P53675 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLTCL1P53675 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLTCL1P53675 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CLTCL1P53675 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLTCL1P53675 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CLTCL1P53675 OR8G2P-201ENST00000412796 908 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.53□□□□□ -1.36
CLTCL1P53675 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.53□□□□□ -1.36
CLTCL1P53675 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.53□□□□□ -1.36
CLTCL1P53675 AC090686.1-201ENST00000481577 749 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 AC020890.1-201ENST00000491837 504 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 AC106806.2-201ENST00000509365 500 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.53□□□□□ -1.36
CLTCL1P53675 AP000619.2-201ENST00000546014 969 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 VN1R85P-201ENST00000601587 426 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 AC245389.2-201ENST00000616023 576 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 AC242843.1-201ENST00000618702 573 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CLTCL1P53675 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.53□□□□□ -1.36
CLTCL1P53675 AC011755.1-201ENST00000623763 2049 ntBASIC6.53□□□□□ -1.36
CLTCL1P53675 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.53□□□□□ -1.36
CLTCL1P53675 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.53□□□□□ -1.36
CLTCL1P53675 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.52□□□□□ -1.37
CLTCL1P53675 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.52□□□□□ -1.37
CLTCL1P53675 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 EIF2AP4-201ENST00000424793 1781 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 RNA5SP366-201ENST00000365454 123 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 Z98745.1-201ENST00000402553 494 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 TDGF1P1-201ENST00000445734 527 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.52□□□□□ -1.37
CLTCL1P53675 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.52□□□□□ -1.37
CLTCL1P53675 MTCO1P35-201ENST00000515270 228 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 AP000827.1-201ENST00000527814 258 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
CLTCL1P53675 BNIP3P5-201ENST00000562290 498 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 AC011477.5-201ENST00000586571 259 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 AP005019.3-201ENST00000620418 560 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 AC010480.1-201ENST00000624823 684 ntBASIC6.52□□□□□ -1.37
CLTCL1P53675 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CLTCL1P53675 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLTCL1P53675 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CLTCL1P53675 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLTCL1P53675 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLTCL1P53675 MIR383-201ENST00000362257 73 ntBASIC6.51□□□□□ -1.37
CLTCL1P53675 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.51□□□□□ -1.37
CLTCL1P53675 RPL23AP26-201ENST00000412728 464 ntBASIC6.51□□□□□ -1.37
CLTCL1P53675 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.51□□□□□ -1.37
CLTCL1P53675 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.51□□□□□ -1.37
CLTCL1P53675 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.51□□□□□ -1.37
CLTCL1P53675 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.51□□□□□ -1.37
CLTCL1P53675 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms