Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TPTE2P3-201ENST00000441562 1189 ntBASIC5.7□□□□□ -1.5
COPAP53621 EXOSC3P1-201ENST00000448649 500 ntBASIC5.7□□□□□ -1.5
COPAP53621 AL606490.1-201ENST00000452266 765 ntBASIC5.7□□□□□ -1.5
COPAP53621 RN7SL727P-201ENST00000482164 296 ntBASIC5.7□□□□□ -1.5
COPAP53621 AC090638.1-201ENST00000498296 909 ntBASIC5.7□□□□□ -1.5
COPAP53621 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 Y_RNA.717-201ENST00000517106 92 ntBASIC5.7□□□□□ -1.5
COPAP53621 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 AL109741.3-201ENST00000561748 592 ntBASIC5.7□□□□□ -1.5
COPAP53621 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 AGGF1P5-201ENST00000567900 919 ntBASIC5.7□□□□□ -1.5
COPAP53621 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 AC006363.1-201ENST00000603806 463 ntBASIC5.7□□□□□ -1.5
COPAP53621 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 AC211433.2-201ENST00000608433 387 ntBASIC5.7□□□□□ -1.5
COPAP53621 CYCSP41-201ENST00000616920 296 ntBASIC5.7□□□□□ -1.5
COPAP53621 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 AC132068.1-201ENST00000623805 459 ntBASIC5.7□□□□□ -1.5
COPAP53621 AC011815.3-201ENST00000624194 473 ntBASIC5.7□□□□□ -1.5
COPAP53621 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 AC109780.1-201ENST00000451768 1344 ntBASIC5.7□□□□□ -1.5
COPAP53621 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COPAP53621 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 C4BPAP1-201ENST00000415474 1893 ntBASIC5.69□□□□□ -1.5
COPAP53621 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
COPAP53621 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 MTCO1P18-201ENST00000455518 1419 ntBASIC5.69□□□□□ -1.5
COPAP53621 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 RNU6-666P-201ENST00000363499 107 ntBASIC5.69□□□□□ -1.5
COPAP53621 SNORA58B-201ENST00000364259 136 ntBASIC5.69□□□□□ -1.5
COPAP53621 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COPAP53621 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 RNU6-532P-201ENST00000384318 107 ntBASIC5.69□□□□□ -1.5
COPAP53621 RNA5SP91-201ENST00000390902 119 ntBASIC5.69□□□□□ -1.5
COPAP53621 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 ZNF602P-201ENST00000405929 924 ntBASIC5.69□□□□□ -1.5
COPAP53621 SPTLC1P2-201ENST00000407089 121 ntBASIC5.69□□□□□ -1.5
COPAP53621 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.69□□□□□ -1.5
COPAP53621 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 LINC01347-201ENST00000417964 355 ntBASIC5.69□□□□□ -1.5
COPAP53621 OR6K4P-201ENST00000423179 955 ntBASIC5.69□□□□□ -1.5
COPAP53621 VN1R21P-201ENST00000426703 765 ntBASIC5.69□□□□□ -1.5
COPAP53621 AL136231.1-201ENST00000429407 730 ntBASIC5.69□□□□□ -1.5
COPAP53621 AC022022.1-201ENST00000430304 178 ntBASIC5.69□□□□□ -1.5
COPAP53621 ETF1P3-201ENST00000430422 1160 ntBASIC5.69□□□□□ -1.5
COPAP53621 CYCSP12-201ENST00000437729 300 ntBASIC5.69□□□□□ -1.5
COPAP53621 CACYBPP1-201ENST00000438592 684 ntBASIC5.69□□□□□ -1.5
COPAP53621 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.69□□□□□ -1.5
COPAP53621 RPL34P26-201ENST00000445636 354 ntBASIC5.69□□□□□ -1.5
COPAP53621 AC092685.1-201ENST00000447960 1243 ntBASIC5.69□□□□□ -1.5
COPAP53621 AL009048.1-201ENST00000450437 298 ntBASIC5.69□□□□□ -1.5
COPAP53621 Z95152.1-201ENST00000453556 656 ntBASIC5.69□□□□□ -1.5
COPAP53621 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 RPS23P2-201ENST00000463671 415 ntBASIC5.69□□□□□ -1.5
COPAP53621 OR2AO1P-201ENST00000476497 403 ntBASIC5.69□□□□□ -1.5
COPAP53621 RPS27AP16-201ENST00000492222 470 ntBASIC5.69□□□□□ -1.5
COPAP53621 DUTP1-201ENST00000493631 470 ntBASIC5.69□□□□□ -1.5
COPAP53621 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 GAPDHP62-201ENST00000515313 990 ntBASIC5.69□□□□□ -1.5
COPAP53621 FTH1P11-201ENST00000517577 551 ntBASIC5.69□□□□□ -1.5
COPAP53621 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.69□□□□□ -1.5
COPAP53621 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.69□□□□□ -1.5
COPAP53621 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.69□□□□□ -1.5
COPAP53621 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 MIR4789-201ENST00000577469 82 ntBASIC5.69□□□□□ -1.5
COPAP53621 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 RN7SL622P-201ENST00000585292 275 ntBASIC5.69□□□□□ -1.5
COPAP53621 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.69□□□□□ -1.5
COPAP53621 AC010503.3-201ENST00000594355 540 ntBASIC5.69□□□□□ -1.5
COPAP53621 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COPAP53621 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 RPP40P2-201ENST00000603596 712 ntBASIC5.69□□□□□ -1.5
COPAP53621 AC096553.1-201ENST00000605169 829 ntBASIC5.69□□□□□ -1.5
COPAP53621 HIRAP1-201ENST00000605318 787 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms