Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 AC010376.1-201ENST00000522101 334 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 NPM1P35-201ENST00000533043 868 ntBASIC5.69□□□□□ -1.5
COPB1P53618 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.69□□□□□ -1.5
COPB1P53618 AC025918.2-201ENST00000558683 763 ntBASIC5.69□□□□□ -1.5
COPB1P53618 RPL10P14-201ENST00000565265 298 ntBASIC5.69□□□□□ -1.5
COPB1P53618 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.69□□□□□ -1.5
COPB1P53618 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.69□□□□□ -1.5
COPB1P53618 AL606834.3-201ENST00000602615 496 ntBASIC5.69□□□□□ -1.5
COPB1P53618 RPP40P2-201ENST00000603596 712 ntBASIC5.69□□□□□ -1.5
COPB1P53618 FO393422.1-201ENST00000603908 708 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC010245.2-201ENST00000606908 1167 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC021851.1-201ENST00000608537 1082 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC015922.4-201ENST00000612568 690 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC019080.5-201ENST00000624891 757 ntBASIC5.69□□□□□ -1.5
COPB1P53618 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 AC116158.1-201ENST00000560231 2129 ntBASIC5.69□□□□□ -1.5
COPB1P53618 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.69□□□□□ -1.5
COPB1P53618 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COPB1P53618 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COPB1P53618 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.68□□□□□ -1.5
COPB1P53618 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPB1P53618 AC017079.1-201ENST00000333650 415 ntBASIC5.68□□□□□ -1.5
COPB1P53618 RNA5SP90-201ENST00000364801 99 ntBASIC5.68□□□□□ -1.5
COPB1P53618 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPB1P53618 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 OR8V1P-201ENST00000395193 873 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC096533.1-201ENST00000411645 353 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AC007738.1-201ENST00000413892 348 ntBASIC5.68□□□□□ -1.5
COPB1P53618 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.68□□□□□ -1.5
COPB1P53618 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 MTCO1P51-201ENST00000427672 1060 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 ELOCP11-201ENST00000436690 332 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC006994.1-201ENST00000438212 839 ntBASIC5.68□□□□□ -1.5
COPB1P53618 ELOCP16-201ENST00000444494 332 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC044797.1-201ENST00000445744 679 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC099063.2-201ENST00000446360 662 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AL627224.1-201ENST00000448334 444 ntBASIC5.68□□□□□ -1.5
COPB1P53618 RPL23AP23-201ENST00000452590 471 ntBASIC5.68□□□□□ -1.5
COPB1P53618 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.68□□□□□ -1.5
COPB1P53618 RPL35AP19-201ENST00000469425 329 ntBASIC5.68□□□□□ -1.5
COPB1P53618 CYCSP20-201ENST00000473154 315 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC020898.1-201ENST00000474167 787 ntBASIC5.68□□□□□ -1.5
COPB1P53618 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AC008410.1-201ENST00000483777 339 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC005412.2-201ENST00000492004 341 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.68□□□□□ -1.5
COPB1P53618 AC097173.1-201ENST00000505862 819 ntBASIC5.68□□□□□ -1.5
COPB1P53618 SUMO2P5-201ENST00000506790 245 ntBASIC5.68□□□□□ -1.5
COPB1P53618 PRELID3BP5-201ENST00000508612 460 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.68□□□□□ -1.5
COPB1P53618 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPB1P53618 AC087894.1-201ENST00000538359 518 ntBASIC5.68□□□□□ -1.5
COPB1P53618 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AC090888.2-201ENST00000559765 1144 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AL132657.2-201ENST00000564417 358 ntBASIC5.68□□□□□ -1.5
COPB1P53618 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.68□□□□□ -1.5
COPB1P53618 SNORD95-201ENST00000579879 68 ntBASIC5.68□□□□□ -1.5
COPB1P53618 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 AC011840.5-201ENST00000582125 771 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.68□□□□□ -1.5
COPB1P53618 AC009159.2-201ENST00000617603 606 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC078880.5-201ENST00000617845 421 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AL512427.1-201ENST00000618593 349 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC009039.2-201ENST00000624524 529 ntBASIC5.68□□□□□ -1.5
COPB1P53618 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPB1P53618 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPB1P53618 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPB1P53618 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.68□□□□□ -1.5
COPB1P53618 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPB1P53618 AC092747.4-201ENST00000620519 1861 ntBASIC5.68□□□□□ -1.5
COPB1P53618 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.68□□□□□ -1.5
COPB1P53618 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms