Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 AP000580.1-201ENST00000404439 358 ntBASIC5.16□□□□□ -1.58
CASP4P49662 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 AL121878.1-201ENST00000418638 859 ntBASIC5.16□□□□□ -1.58
CASP4P49662 FABP7P1-201ENST00000424004 391 ntBASIC5.16□□□□□ -1.58
CASP4P49662 NMNAT1P2-201ENST00000435192 860 ntBASIC5.16□□□□□ -1.58
CASP4P49662 RPL36AP15-201ENST00000444514 266 ntBASIC5.16□□□□□ -1.58
CASP4P49662 OR1H1P-201ENST00000448731 937 ntBASIC5.16□□□□□ -1.58
CASP4P49662 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.16□□□□□ -1.58
CASP4P49662 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.16□□□□□ -1.58
CASP4P49662 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.16□□□□□ -1.58
CASP4P49662 RNU4-18P-201ENST00000516751 149 ntBASIC5.16□□□□□ -1.58
CASP4P49662 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.16□□□□□ -1.58
CASP4P49662 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CASP4P49662 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.16□□□□□ -1.58
CASP4P49662 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.16□□□□□ -1.58
CASP4P49662 AC105129.1-201ENST00000560250 297 ntBASIC5.16□□□□□ -1.58
CASP4P49662 MIR4472-2-201ENST00000582069 67 ntBASIC5.16□□□□□ -1.58
CASP4P49662 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.16□□□□□ -1.58
CASP4P49662 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.16□□□□□ -1.58
CASP4P49662 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CASP4P49662 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.16□□□□□ -1.58
CASP4P49662 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.16□□□□□ -1.58
CASP4P49662 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.16□□□□□ -1.58
CASP4P49662 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.15□□□□□ -1.58
CASP4P49662 AC010928.1-201ENST00000592477 1447 ntBASIC5.15□□□□□ -1.58
CASP4P49662 AC007382.1-201ENST00000624376 2618 ntBASIC5.15□□□□□ -1.58
CASP4P49662 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CASP4P49662 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CASP4P49662 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CASP4P49662 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CASP4P49662 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CASP4P49662 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CASP4P49662 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CASP4P49662 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.15□□□□□ -1.59
CASP4P49662 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.15□□□□□ -1.59
CASP4P49662 AL360081.1-201ENST00000428299 555 ntBASIC5.15□□□□□ -1.59
CASP4P49662 NRBF2P3-201ENST00000432731 865 ntBASIC5.15□□□□□ -1.59
CASP4P49662 AC097523.2-201ENST00000435551 652 ntBASIC5.15□□□□□ -1.59
CASP4P49662 AC083982.1-201ENST00000485679 344 ntBASIC5.15□□□□□ -1.59
CASP4P49662 AC023424.1-201ENST00000496058 459 ntBASIC5.15□□□□□ -1.59
CASP4P49662 RN7SKP276-201ENST00000516242 268 ntBASIC5.15□□□□□ -1.59
CASP4P49662 OR10D4P-201ENST00000525892 951 ntBASIC5.15□□□□□ -1.59
CASP4P49662 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.15□□□□□ -1.59
CASP4P49662 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.15□□□□□ -1.59
CASP4P49662 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.15□□□□□ -1.59
CASP4P49662 AC007448.1-201ENST00000582714 234 ntBASIC5.15□□□□□ -1.59
CASP4P49662 MIR4737-201ENST00000583979 81 ntBASIC5.15□□□□□ -1.59
CASP4P49662 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CASP4P49662 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
CASP4P49662 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CASP4P49662 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CASP4P49662 AL359922.3-201ENST00000624779 1670 ntBASIC5.15□□□□□ -1.59
CASP4P49662 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CASP4P49662 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CASP4P49662 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CASP4P49662 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CASP4P49662 AL022322.2-201ENST00000624072 20397 ntBASIC5.14□□□□□ -1.59
CASP4P49662 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CASP4P49662 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CASP4P49662 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CASP4P49662 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CASP4P49662 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CASP4P49662 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.14□□□□□ -1.59
CASP4P49662 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CASP4P49662 AL080315.1-201ENST00000406055 466 ntBASIC5.14□□□□□ -1.59
CASP4P49662 SNORA79B-201ENST00000410557 148 ntBASIC5.14□□□□□ -1.59
CASP4P49662 RN7SKP100-201ENST00000411258 284 ntBASIC5.14□□□□□ -1.59
CASP4P49662 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.14□□□□□ -1.59
CASP4P49662 BTG3P1-201ENST00000435859 716 ntBASIC5.14□□□□□ -1.59
CASP4P49662 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.14□□□□□ -1.59
CASP4P49662 AC005154.2-201ENST00000438110 379 ntBASIC5.14□□□□□ -1.59
CASP4P49662 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.14□□□□□ -1.59
CASP4P49662 MRPL48P1-201ENST00000445390 636 ntBASIC5.14□□□□□ -1.59
CASP4P49662 AC108463.1-201ENST00000450258 347 ntBASIC5.14□□□□□ -1.59
CASP4P49662 AC092324.1-201ENST00000468671 324 ntBASIC5.14□□□□□ -1.59
CASP4P49662 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CASP4P49662 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.14□□□□□ -1.59
CASP4P49662 AL671862.1-201ENST00000515851 349 ntBASIC5.14□□□□□ -1.59
CASP4P49662 RNU1-6P-201ENST00000516290 144 ntBASIC5.14□□□□□ -1.59
CASP4P49662 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.14□□□□□ -1.59
CASP4P49662 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.14□□□□□ -1.59
CASP4P49662 EDDM3DP-201ENST00000554692 434 ntBASIC5.14□□□□□ -1.59
CASP4P49662 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.14□□□□□ -1.59
CASP4P49662 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CASP4P49662 AC130352.1-201ENST00000602979 661 ntBASIC5.14□□□□□ -1.59
CASP4P49662 AC073137.1-201ENST00000605636 634 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms