Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.31□□□□□ -1.24
VARSP26640 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
VARSP26640 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.31□□□□□ -1.24
VARSP26640 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
VARSP26640 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 AC092447.10-201ENST00000620607 1652 ntBASIC7.31□□□□□ -1.24
VARSP26640 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.31□□□□□ -1.24
VARSP26640 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
VARSP26640 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VARSP26640 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
VARSP26640 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 BRAFP1-201ENST00000445336 2703 ntBASIC7.3□□□□□ -1.24
VARSP26640 CASC19-260ENST00000641828 2001 ntBASIC7.3□□□□□ -1.24
VARSP26640 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.3□□□□□ -1.24
VARSP26640 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.3□□□□□ -1.24
VARSP26640 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
VARSP26640 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
VARSP26640 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
VARSP26640 Y_RNA.188-201ENST00000363952 111 ntBASIC7.3□□□□□ -1.24
VARSP26640 RN7SKP6-201ENST00000364795 319 ntBASIC7.3□□□□□ -1.24
VARSP26640 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 SNORD116-23-201ENST00000384645 92 ntBASIC7.3□□□□□ -1.24
VARSP26640 RNU6-308P-201ENST00000390957 107 ntBASIC7.3□□□□□ -1.24
VARSP26640 RNU6-1158P-201ENST00000391167 107 ntBASIC7.3□□□□□ -1.24
VARSP26640 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 GLRXP3-201ENST00000470810 321 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC018475.1-201ENST00000478358 465 ntBASIC7.3□□□□□ -1.24
VARSP26640 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.3□□□□□ -1.24
VARSP26640 RN7SL283P-201ENST00000489055 303 ntBASIC7.3□□□□□ -1.24
VARSP26640 GAPDHP56-201ENST00000506031 988 ntBASIC7.3□□□□□ -1.24
VARSP26640 PCBP2P3-201ENST00000509726 843 ntBASIC7.3□□□□□ -1.24
VARSP26640 MTCO2P24-201ENST00000515611 426 ntBASIC7.3□□□□□ -1.24
VARSP26640 SNORA40.12-201ENST00000516329 111 ntBASIC7.3□□□□□ -1.24
VARSP26640 RNU6-1314P-201ENST00000517139 104 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 AC090415.1-201ENST00000581877 847 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.3□□□□□ -1.24
VARSP26640 CR382285.1-202ENST00000604687 547 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC004852.1-201ENST00000605206 154 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC021646.1-201ENST00000605469 484 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC092807.2-201ENST00000609367 243 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC078899.5-201ENST00000612475 178 ntBASIC7.3□□□□□ -1.24
VARSP26640 RFPL4AP6-201ENST00000616792 846 ntBASIC7.3□□□□□ -1.24
VARSP26640 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.3□□□□□ -1.24
VARSP26640 AL353898.2-201ENST00000623000 255 ntBASIC7.3□□□□□ -1.24
VARSP26640 AC093909.6-201ENST00000624757 775 ntBASIC7.3□□□□□ -1.24
VARSP26640 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.3□□□□□ -1.24
VARSP26640 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.3□□□□□ -1.24
VARSP26640 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.3□□□□□ -1.24
VARSP26640 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
VARSP26640 AC069222.1-201ENST00000608028 3360 ntBASIC7.29□□□□□ -1.24
VARSP26640 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
VARSP26640 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 RBPJP7-201ENST00000442803 1447 ntBASIC7.29□□□□□ -1.24
VARSP26640 RBPJP5-201ENST00000449433 1447 ntBASIC7.29□□□□□ -1.24
VARSP26640 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.29□□□□□ -1.24
VARSP26640 AC018688.1-201ENST00000636528 1754 ntBASIC7.29□□□□□ -1.24
VARSP26640 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VARSP26640 RPL7P26-201ENST00000333817 754 ntBASIC7.29□□□□□ -1.24
VARSP26640 Y_RNA.395-201ENST00000383945 109 ntBASIC7.29□□□□□ -1.24
VARSP26640 SNORD116-29-201ENST00000384516 83 ntBASIC7.29□□□□□ -1.24
VARSP26640 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms