Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC022417.1-201ENST00000624768 1303 ntBASIC5.67□□□□□ -1.5
BDNFP23560 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BDNFP23560 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BDNFP23560 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.67□□□□□ -1.5
BDNFP23560 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.66□□□□□ -1.5
BDNFP23560 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.66□□□□□ -1.5
BDNFP23560 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 HSPA8P15-201ENST00000401676 786 ntBASIC5.66□□□□□ -1.5
BDNFP23560 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 SPTLC1P2-201ENST00000407089 121 ntBASIC5.66□□□□□ -1.5
BDNFP23560 RN7SKP273-201ENST00000411392 314 ntBASIC5.66□□□□□ -1.5
BDNFP23560 TCEA1P4-201ENST00000415066 844 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AC234782.4-201ENST00000417646 1048 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AC093655.2-201ENST00000425735 631 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AL031736.2-201ENST00000426573 787 ntBASIC5.66□□□□□ -1.5
BDNFP23560 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.66□□□□□ -1.5
BDNFP23560 ACTR3P2-201ENST00000439585 1257 ntBASIC5.66□□□□□ -1.5
BDNFP23560 EEF1B2P5-201ENST00000444820 548 ntBASIC5.66□□□□□ -1.5
BDNFP23560 GAPDHP14-201ENST00000450472 937 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AC104634.1-201ENST00000452720 462 ntBASIC5.66□□□□□ -1.5
BDNFP23560 RPL7P6-201ENST00000480903 738 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AC093763.2-201ENST00000505334 1223 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.66□□□□□ -1.5
BDNFP23560 SCARNA20.4-201ENST00000516969 131 ntBASIC5.66□□□□□ -1.5
BDNFP23560 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.66□□□□□ -1.5
BDNFP23560 OR4A17P-201ENST00000526032 904 ntBASIC5.66□□□□□ -1.5
BDNFP23560 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.66□□□□□ -1.5
BDNFP23560 HAUS8P1-201ENST00000549005 542 ntBASIC5.66□□□□□ -1.5
BDNFP23560 OR11J2P-201ENST00000555298 907 ntBASIC5.66□□□□□ -1.5
BDNFP23560 NMNAT1P5-201ENST00000559657 841 ntBASIC5.66□□□□□ -1.5
BDNFP23560 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.66□□□□□ -1.5
BDNFP23560 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.66□□□□□ -1.5
BDNFP23560 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
BDNFP23560 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.66□□□□□ -1.5
BDNFP23560 AL139124.1-201ENST00000609123 421 ntBASIC5.66□□□□□ -1.5
BDNFP23560 HPVC1-201ENST00000629899 1198 ntBASIC5.66□□□□□ -1.5
BDNFP23560 CDRT1-208ENST00000630868 794 ntBASIC5.66□□□□□ -1.5
BDNFP23560 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BDNFP23560 AP001273.1-201ENST00000624493 3152 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AC104260.2-201ENST00000623551 3497 ntBASIC5.65□□□□□ -1.5
BDNFP23560 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.65□□□□□ -1.5
BDNFP23560 AC009951.1-201ENST00000623674 2614 ntBASIC5.65□□□□□ -1.5
BDNFP23560 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BDNFP23560 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.65□□□□□ -1.5
BDNFP23560 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 RNU1-19P-201ENST00000363306 165 ntBASIC5.65□□□□□ -1.5
BDNFP23560 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 MIR105-1-201ENST00000385222 81 ntBASIC5.65□□□□□ -1.5
BDNFP23560 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 PPIAP9-201ENST00000403866 498 ntBASIC5.65□□□□□ -1.5
BDNFP23560 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 NDUFB4P8-201ENST00000435351 367 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 MTCO3P43-201ENST00000440974 771 ntBASIC5.65□□□□□ -1.5
BDNFP23560 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.65□□□□□ -1.5
BDNFP23560 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 MTND2P6-201ENST00000455337 1030 ntBASIC5.65□□□□□ -1.5
BDNFP23560 RPS18P6-201ENST00000476880 458 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AL161747.1-201ENST00000480068 358 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AC004815.1-201ENST00000484185 331 ntBASIC5.65□□□□□ -1.5
BDNFP23560 OR5M14P-201ENST00000506803 618 ntBASIC5.65□□□□□ -1.5
BDNFP23560 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 AC111000.6-201ENST00000514471 709 ntBASIC5.65□□□□□ -1.5
BDNFP23560 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.65□□□□□ -1.5
BDNFP23560 AC026688.1-201ENST00000520639 1168 ntBASIC5.65□□□□□ -1.5
BDNFP23560 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.65□□□□□ -1.5
BDNFP23560 OR4A2P-201ENST00000527276 913 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AC079064.1-201ENST00000528365 362 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BDNFP23560 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
BDNFP23560 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.65□□□□□ -1.5
BDNFP23560 KATNBL1P5-201ENST00000605015 517 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AC011374.2-201ENST00000607135 526 ntBASIC5.65□□□□□ -1.5
BDNFP23560 AP001033.2-201ENST00000609701 1003 ntBASIC5.65□□□□□ -1.5
BDNFP23560 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BDNFP23560 AL137100.1-201ENST00000556703 1620 ntBASIC5.65□□□□□ -1.51
BDNFP23560 AC007938.2-201ENST00000604666 2634 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms