Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.88□□□□□ -1.63
XRCC1P18887 RN7SKP46-201ENST00000515942 234 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 AP002981.1-201ENST00000517692 975 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.88□□□□□ -1.63
XRCC1P18887 AC021006.3-201ENST00000530771 192 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.88□□□□□ -1.63
XRCC1P18887 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.88□□□□□ -1.63
XRCC1P18887 AL512310.9-201ENST00000553311 948 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.88□□□□□ -1.63
XRCC1P18887 MIR4480-201ENST00000582492 71 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 OR7M1P-201ENST00000608946 533 ntBASIC4.88□□□□□ -1.63
XRCC1P18887 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
XRCC1P18887 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
XRCC1P18887 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
XRCC1P18887 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
XRCC1P18887 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
XRCC1P18887 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.87□□□□□ -1.63
XRCC1P18887 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 RN7SKP103-201ENST00000363848 320 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 SEPT7P8-201ENST00000413308 775 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 TMBIM7P-201ENST00000418074 855 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 RPL7P11-201ENST00000437586 658 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AC112498.1-201ENST00000444401 332 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.87□□□□□ -1.63
XRCC1P18887 AL445433.1-201ENST00000457507 257 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 GYG1P1-201ENST00000460864 698 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.87□□□□□ -1.63
XRCC1P18887 GAPDHP56-201ENST00000506031 988 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 AC022784.5-201ENST00000522241 437 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.87□□□□□ -1.63
XRCC1P18887 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 AL049830.4-201ENST00000555149 351 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 BGLT3-201ENST00000564523 994 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.87□□□□□ -1.63
XRCC1P18887 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.87□□□□□ -1.63
XRCC1P18887 RNF138P2-201ENST00000603490 592 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AC087783.2-201ENST00000605070 562 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 AC005377.1-201ENST00000605126 456 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 FAM25E-202ENST00000608562 189 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
XRCC1P18887 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
XRCC1P18887 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.87□□□□□ -1.63
XRCC1P18887 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
XRCC1P18887 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.87□□□□□ -1.63
XRCC1P18887 IRF5P1-201ENST00000504852 2164 ntBASIC4.87□□□□□ -1.63
XRCC1P18887 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.86□□□□□ -1.63
XRCC1P18887 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.86□□□□□ -1.63
XRCC1P18887 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
XRCC1P18887 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.86□□□□□ -1.63
XRCC1P18887 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
XRCC1P18887 AL035419.1-201ENST00000397037 564 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AL035696.2-201ENST00000407941 709 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
XRCC1P18887 AF186996.5-201ENST00000418098 904 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 NPM1P33-201ENST00000438918 872 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.86□□□□□ -1.63
XRCC1P18887 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC239798.3-201ENST00000454459 408 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 HMGB1P4-201ENST00000455362 567 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC020890.1-201ENST00000491837 504 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.86□□□□□ -1.63
XRCC1P18887 AC073358.1-201ENST00000505671 684 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 MRPS33P2-201ENST00000507850 322 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 BTF3P13-201ENST00000513224 490 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC012339.2-201ENST00000523996 453 ntBASIC4.86□□□□□ -1.63
XRCC1P18887 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms