Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.79□□□□□ -1.8
CCL3L1P16619 RPL21P43-201ENST00000425440 472 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 AL935212.3-201ENST00000450729 284 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 SETP4-201ENST00000455717 868 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL3L1P16619 SCARNA10-201ENST00000459255 330 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 AC112206.1-201ENST00000468416 477 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 RPL23AP72-201ENST00000492447 435 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL3L1P16619 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL3L1P16619 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL3L1P16619 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.79□□□□□ -1.8
CCL3L1P16619 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL3L1P16619 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCL3L1P16619 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL3L1P16619 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.79□□□□□ -1.8
CCL3L1P16619 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CCL3L1P16619 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL3L1P16619 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.79□□□□□ -1.8
CCL3L1P16619 AC005520.3-201ENST00000602874 370 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 AL133338.2-201ENST00000604292 736 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 IMMP1LP1-201ENST00000605170 488 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL3L1P16619 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL3L1P16619 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCL3L1P16619 AC126323.6-202ENST00000568092 3511 ntBASIC3.79□□□□□ -1.8
CCL3L1P16619 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCL3L1P16619 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCL3L1P16619 AL133268.1-201ENST00000405676 1401 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 TCP11X1-202ENST00000622971 1372 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 OR56B2P-201ENST00000317102 954 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 SNORA11B-201ENST00000408175 129 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 Z74021.1-201ENST00000423610 407 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 SETP9-201ENST00000423837 832 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 RPS12P10-201ENST00000427031 377 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AL359265.2-201ENST00000434367 631 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 RPS26P2-201ENST00000440331 348 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 ISCUP1-201ENST00000454451 448 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AL591473.1-201ENST00000464297 313 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 RPL23AP37-201ENST00000479658 549 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
CCL3L1P16619 AC138938.1-201ENST00000515431 782 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AP001781.1-201ENST00000530977 207 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AP000619.2-201ENST00000546014 969 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AC137768.1-201ENST00000549998 553 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 AC063949.1-201ENST00000552900 865 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.78□□□□□ -1.8
CCL3L1P16619 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 RN7SL690P-201ENST00000582087 240 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 MIR6780A-201ENST00000615089 68 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 MIR7703-201ENST00000620784 77 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCL3L1P16619 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.78□□□□□ -1.8
CCL3L1P16619 AC053481.2-202ENST00000582394 1500 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCL3L1P16619 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCL3L1P16619 OR14L1P-202ENST00000641545 3009 ntBASIC3.78□□□□□ -1.8
CCL3L1P16619 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCL3L1P16619 AC090220.1-201ENST00000593078 1699 ntBASIC3.78□□□□□ -1.81
CCL3L1P16619 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCL3L1P16619 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CCL3L1P16619 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCL3L1P16619 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCL3L1P16619 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCL3L1P16619 MAPK10-303ENST00000641324 3959 ntBASIC3.77□□□□□ -1.81
CCL3L1P16619 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCL3L1P16619 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.77□□□□□ -1.81
CCL3L1P16619 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCL3L1P16619 RNA5SP505-201ENST00000364748 108 ntBASIC3.77□□□□□ -1.81
CCL3L1P16619 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCL3L1P16619 MIR659-201ENST00000384963 97 ntBASIC3.77□□□□□ -1.81
CCL3L1P16619 RNA5SP397-201ENST00000391323 118 ntBASIC3.77□□□□□ -1.81
CCL3L1P16619 OR1F12-201ENST00000402365 945 ntBASIC3.77□□□□□ -1.81
CCL3L1P16619 RPS16P5-201ENST00000406501 404 ntBASIC3.77□□□□□ -1.81
CCL3L1P16619 AC016769.2-201ENST00000414815 475 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms