Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP1P11387 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP1P11387 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 AC027228.2-201ENST00000567141 2154 ntBASIC5.66□□□□□ -1.5
TOP1P11387 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TOP1P11387 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TOP1P11387 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 RPL37P18-201ENST00000411602 243 ntBASIC5.66□□□□□ -1.5
TOP1P11387 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP1P11387 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 AC092162.1-201ENST00000432828 434 ntBASIC5.66□□□□□ -1.5
TOP1P11387 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 AL356981.1-201ENST00000454879 684 ntBASIC5.66□□□□□ -1.5
TOP1P11387 AC011005.3-201ENST00000491624 395 ntBASIC5.66□□□□□ -1.5
TOP1P11387 RN7SL558P-201ENST00000497468 299 ntBASIC5.66□□□□□ -1.5
TOP1P11387 SCARNA22-201ENST00000503991 125 ntBASIC5.66□□□□□ -1.5
TOP1P11387 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.66□□□□□ -1.5
TOP1P11387 RN7SKP34-201ENST00000516142 244 ntBASIC5.66□□□□□ -1.5
TOP1P11387 RN7SKP276-201ENST00000516242 268 ntBASIC5.66□□□□□ -1.5
TOP1P11387 IGKV1-32-201ENST00000519290 311 ntBASIC5.66□□□□□ -1.5
TOP1P11387 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.66□□□□□ -1.5
TOP1P11387 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.66□□□□□ -1.5
TOP1P11387 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP1P11387 MIR4270-201ENST00000581799 70 ntBASIC5.66□□□□□ -1.5
TOP1P11387 AP005262.1-201ENST00000582646 997 ntBASIC5.66□□□□□ -1.5
TOP1P11387 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 AL159169.2-201ENST00000610061 1269 ntBASIC5.66□□□□□ -1.5
TOP1P11387 FAM27B-201ENST00000610601 213 ntBASIC5.66□□□□□ -1.5
TOP1P11387 AC015871.5-202ENST00000623252 701 ntBASIC5.66□□□□□ -1.5
TOP1P11387 AC107021.2-201ENST00000567714 2095 ntBASIC5.66□□□□□ -1.5
TOP1P11387 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP1P11387 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TOP1P11387 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.66□□□□□ -1.5
TOP1P11387 AC009643.2-201ENST00000603543 1448 ntBASIC5.65□□□□□ -1.5
TOP1P11387 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.65□□□□□ -1.5
TOP1P11387 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TOP1P11387 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TOP1P11387 AC093775.1-201ENST00000624154 1868 ntBASIC5.65□□□□□ -1.5
TOP1P11387 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TOP1P11387 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.65□□□□□ -1.5
TOP1P11387 RNU6-1320P-201ENST00000390838 107 ntBASIC5.65□□□□□ -1.5
TOP1P11387 RNU6-1269P-201ENST00000391139 107 ntBASIC5.65□□□□□ -1.5
TOP1P11387 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TOP1P11387 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.65□□□□□ -1.5
TOP1P11387 RPL36AP10-201ENST00000421785 322 ntBASIC5.65□□□□□ -1.5
TOP1P11387 AL645608.4-201ENST00000423619 154 ntBASIC5.65□□□□□ -1.5
TOP1P11387 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
TOP1P11387 AC244033.1-201ENST00000426826 870 ntBASIC5.65□□□□□ -1.5
TOP1P11387 RPL36AP15-201ENST00000444514 266 ntBASIC5.65□□□□□ -1.5
TOP1P11387 RNU6-599P-201ENST00000459383 107 ntBASIC5.65□□□□□ -1.5
TOP1P11387 RNU6-1193P-201ENST00000459461 107 ntBASIC5.65□□□□□ -1.5
TOP1P11387 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.65□□□□□ -1.5
TOP1P11387 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TOP1P11387 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.65□□□□□ -1.5
TOP1P11387 AC007686.1-201ENST00000488511 463 ntBASIC5.65□□□□□ -1.5
TOP1P11387 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TOP1P11387 AC133555.2-201ENST00000550213 292 ntBASIC5.65□□□□□ -1.5
TOP1P11387 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.65□□□□□ -1.5
TOP1P11387 RN7SL802P-201ENST00000577858 299 ntBASIC5.65□□□□□ -1.5
TOP1P11387 AC006272.2-201ENST00000594725 163 ntBASIC5.65□□□□□ -1.5
TOP1P11387 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.65□□□□□ -1.5
TOP1P11387 RNU6-368P-201ENST00000620928 107 ntBASIC5.65□□□□□ -1.5
TOP1P11387 RNU6-538P-201ENST00000622329 107 ntBASIC5.65□□□□□ -1.5
TOP1P11387 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOP1P11387 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TOP1P11387 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.65□□□□□ -1.51
TOP1P11387 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
TOP1P11387 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TOP1P11387 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.65□□□□□ -1.51
TOP1P11387 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
TOP1P11387 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOP1P11387 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TOP1P11387 AC012618.3-205ENST00000637896 1496 ntBASIC5.64□□□□□ -1.51
TOP1P11387 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TOP1P11387 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TOP1P11387 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.64□□□□□ -1.51
TOP1P11387 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOP1P11387 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.64□□□□□ -1.51
TOP1P11387 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TOP1P11387 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOP1P11387 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TOP1P11387 RSU1P3-201ENST00000412878 835 ntBASIC5.64□□□□□ -1.51
TOP1P11387 BX510359.2-201ENST00000417920 305 ntBASIC5.64□□□□□ -1.51
TOP1P11387 LINC00993-201ENST00000420453 540 ntBASIC5.64□□□□□ -1.51
TOP1P11387 RPS17P8-201ENST00000434525 335 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC005154.2-201ENST00000438110 379 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP1P11387 VN1R96P-201ENST00000446052 858 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP1P11387 OR52Y1P-201ENST00000452418 828 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC002553.2-201ENST00000453217 340 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC107015.1-201ENST00000466902 747 ntBASIC5.64□□□□□ -1.51
TOP1P11387 RPS29P22-201ENST00000472363 168 ntBASIC5.64□□□□□ -1.51
TOP1P11387 OR11I1P-201ENST00000486033 954 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC104971.1-201ENST00000495117 578 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP1P11387 RNU6-709P-201ENST00000517257 104 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms