Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNA5SP113-201ENST00000410486 84 ntBASIC5.49□□□□□ -1.53
RB1P06400 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.49□□□□□ -1.53
RB1P06400 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 RPL5P25-201ENST00000441148 775 ntBASIC5.49□□□□□ -1.53
RB1P06400 AC007000.2-201ENST00000442564 487 ntBASIC5.49□□□□□ -1.53
RB1P06400 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 CALM1P2-201ENST00000452941 448 ntBASIC5.49□□□□□ -1.53
RB1P06400 AC092905.1-201ENST00000467527 949 ntBASIC5.49□□□□□ -1.53
RB1P06400 RN7SL354P-201ENST00000469282 294 ntBASIC5.49□□□□□ -1.53
RB1P06400 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 AC025768.1-201ENST00000510057 267 ntBASIC5.49□□□□□ -1.53
RB1P06400 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 RNA5SP43-201ENST00000516559 110 ntBASIC5.49□□□□□ -1.53
RB1P06400 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.49□□□□□ -1.53
RB1P06400 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 AC027176.2-201ENST00000559166 746 ntBASIC5.49□□□□□ -1.53
RB1P06400 MIR5096-201ENST00000583713 70 ntBASIC5.49□□□□□ -1.53
RB1P06400 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.49□□□□□ -1.53
RB1P06400 AL671309.1-201ENST00000603750 544 ntBASIC5.49□□□□□ -1.53
RB1P06400 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
RB1P06400 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.49□□□□□ -1.53
RB1P06400 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.49□□□□□ -1.53
RB1P06400 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 AC097461.1-201ENST00000568928 2821 ntBASIC5.49□□□□□ -1.53
RB1P06400 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.49□□□□□ -1.53
RB1P06400 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RB1P06400 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RB1P06400 SAMMSON-213ENST00000641336 1521 ntBASIC5.48□□□□□ -1.53
RB1P06400 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 AL359715.3-201ENST00000569267 2123 ntBASIC5.48□□□□□ -1.53
RB1P06400 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.48□□□□□ -1.53
RB1P06400 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
RB1P06400 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 SPATA2P1-201ENST00000431223 2055 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC079097.1-201ENST00000512187 1399 ntBASIC5.48□□□□□ -1.53
RB1P06400 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
RB1P06400 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
RB1P06400 RNU1-74P-201ENST00000384108 171 ntBASIC5.48□□□□□ -1.53
RB1P06400 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 BX276092.6-201ENST00000430476 250 ntBASIC5.48□□□□□ -1.53
RB1P06400 AL359265.2-201ENST00000434367 631 ntBASIC5.48□□□□□ -1.53
RB1P06400 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 OR7E125P-201ENST00000443450 846 ntBASIC5.48□□□□□ -1.53
RB1P06400 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 AL137845.2-201ENST00000444292 988 ntBASIC5.48□□□□□ -1.53
RB1P06400 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RB1P06400 BX276092.8-201ENST00000455722 250 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 NOP56P3-201ENST00000549457 385 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.48□□□□□ -1.53
RB1P06400 ADAD1P2-201ENST00000588476 646 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC068020.1-201ENST00000594215 661 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC130352.1-201ENST00000602979 661 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC105254.2-201ENST00000603636 436 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC104687.2-201ENST00000604442 342 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC083809.1-201ENST00000615051 472 ntBASIC5.48□□□□□ -1.53
RB1P06400 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.48□□□□□ -1.53
RB1P06400 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.48□□□□□ -1.53
RB1P06400 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC106730.3-201ENST00000624568 641 ntBASIC5.48□□□□□ -1.53
RB1P06400 AC016717.3-201ENST00000624730 554 ntBASIC5.48□□□□□ -1.53
RB1P06400 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RB1P06400 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
RB1P06400 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RB1P06400 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RB1P06400 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RB1P06400 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 AL606537.1-201ENST00000607258 2011 ntBASIC5.47□□□□□ -1.53
RB1P06400 RN7SKP153-201ENST00000365026 316 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 AC104297.1-201ENST00000393779 870 ntBASIC5.47□□□□□ -1.53
RB1P06400 RPS3AP23-201ENST00000401762 784 ntBASIC5.47□□□□□ -1.53
RB1P06400 AL021331.1-201ENST00000402817 582 ntBASIC5.47□□□□□ -1.53
RB1P06400 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.47□□□□□ -1.53
RB1P06400 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.47□□□□□ -1.53
RB1P06400 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RB1P06400 AC009480.2-201ENST00000422916 432 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms