Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SNORA3C-201ENST00000408792 125 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 COX6B1P7-201ENST00000430845 235 ntBASIC2.02□□□□□ -2.09
USH2AO75445 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC2.02□□□□□ -2.09
USH2AO75445 U8.18-201ENST00000459285 133 ntBASIC2.02□□□□□ -2.09
USH2AO75445 GAPDHP36-201ENST00000480688 918 ntBASIC2.02□□□□□ -2.09
USH2AO75445 RNU6-709P-201ENST00000517257 104 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.02□□□□□ -2.09
USH2AO75445 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
USH2AO75445 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USH2AO75445 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 E2F6P2-201ENST00000420708 748 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC2.02□□□□□ -2.09
USH2AO75445 RPL19P16-201ENST00000433839 588 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AC073052.1-201ENST00000440417 714 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.02□□□□□ -2.09
USH2AO75445 EIF4BP1-201ENST00000554881 351 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AC027455.1-201ENST00000574104 594 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 MIR8089-201ENST00000620165 82 ntBASIC2.02□□□□□ -2.09
USH2AO75445 AL034408.1-202ENST00000636088 415 ntBASIC2.02□□□□□ -2.09
USH2AO75445 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USH2AO75445 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC2.02□□□□□ -2.09
USH2AO75445 AC025574.1-201ENST00000554784 1653 ntBASIC2.02□□□□□ -2.09
USH2AO75445 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC2.02□□□□□ -2.09
USH2AO75445 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 RN7SKP17-201ENST00000411242 351 ntBASIC2.01□□□□□ -2.09
USH2AO75445 RPL23AP38-201ENST00000423801 469 ntBASIC2.01□□□□□ -2.09
USH2AO75445 ENPP7P11-201ENST00000505915 627 ntBASIC2.01□□□□□ -2.09
USH2AO75445 KCTD9P2-201ENST00000512203 1013 ntBASIC2.01□□□□□ -2.09
USH2AO75445 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AC006116.5-201ENST00000591936 559 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AC108359.1-201ENST00000616451 1211 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AC004836.1-201ENST00000623032 634 ntBASIC2.01□□□□□ -2.09
USH2AO75445 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 AC007614.5-201ENST00000623424 8892 ntBASIC2.01□□□□□ -2.09
USH2AO75445 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USH2AO75445 RN7SKP235-201ENST00000410662 305 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AC017019.1-201ENST00000426129 261 ntBASIC2.01□□□□□ -2.09
USH2AO75445 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AL136097.1-201ENST00000456945 913 ntBASIC2.01□□□□□ -2.09
USH2AO75445 HMGN1P15-201ENST00000513870 295 ntBASIC2.01□□□□□ -2.09
USH2AO75445 RNA5SP519-201ENST00000516480 119 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.01□□□□□ -2.09
USH2AO75445 CARD16-203ENST00000525374 503 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 AC133552.1-201ENST00000569988 4007 ntBASIC2.01□□□□□ -2.09
USH2AO75445 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms