Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RN7SKP16-201ENST00000410180 299 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RN7SKP97-201ENST00000410966 333 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AC069282.1-201ENST00000411911 526 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.83□□□□□ -1.64
SSX4O60224 RPL35AP24-201ENST00000413846 330 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.83□□□□□ -1.64
SSX4O60224 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 AC013410.2-201ENST00000422627 201 ntBASIC4.83□□□□□ -1.64
SSX4O60224 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 HSPD1P12-201ENST00000429127 1069 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RPL7AP49-201ENST00000429522 581 ntBASIC4.83□□□□□ -1.64
SSX4O60224 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 AL035458.1-201ENST00000433096 585 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AL591438.1-201ENST00000433508 581 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AP000936.3-201ENST00000438127 255 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 AL035551.1-201ENST00000446931 348 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 AC002553.2-201ENST00000453217 340 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RNA5SP103-201ENST00000459503 118 ntBASIC4.83□□□□□ -1.64
SSX4O60224 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 RN7SL188P-201ENST00000469842 285 ntBASIC4.83□□□□□ -1.64
SSX4O60224 SETP6-201ENST00000479329 568 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 NAMPTP2-201ENST00000505629 1115 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 EIF3KP3-201ENST00000514461 639 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RNA5SP464-201ENST00000516251 108 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RN7SKP253-201ENST00000516424 309 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RNA5SP92-201ENST00000516437 110 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RN7SKP99-201ENST00000517028 307 ntBASIC4.83□□□□□ -1.64
SSX4O60224 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.83□□□□□ -1.64
SSX4O60224 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 NRBF2P4-201ENST00000520874 850 ntBASIC4.83□□□□□ -1.64
SSX4O60224 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.83□□□□□ -1.64
SSX4O60224 MRPS21P7-201ENST00000566937 238 ntBASIC4.83□□□□□ -1.64
SSX4O60224 DPRXP4-201ENST00000578053 568 ntBASIC4.83□□□□□ -1.64
SSX4O60224 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX4O60224 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 AC063977.5-201ENST00000601044 974 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AC112503.2-201ENST00000609005 552 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AL359513.1-201ENST00000614364 557 ntBASIC4.83□□□□□ -1.64
SSX4O60224 MIR6837-201ENST00000620884 64 ntBASIC4.83□□□□□ -1.64
SSX4O60224 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 AC112198.2-201ENST00000426589 6996 ntBASIC4.83□□□□□ -1.64
SSX4O60224 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 STX3-208ENST00000641815 3236 ntBASIC4.83□□□□□ -1.64
SSX4O60224 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 AC053481.2-202ENST00000582394 1500 ntBASIC4.82□□□□□ -1.64
SSX4O60224 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 AC126323.6-202ENST00000568092 3511 ntBASIC4.82□□□□□ -1.64
SSX4O60224 CASC19-284ENST00000642142 1868 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC109780.1-201ENST00000451768 1344 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC235565.1-201ENST00000456962 1325 ntBASIC4.82□□□□□ -1.64
SSX4O60224 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 MIR130A-201ENST00000385274 89 ntBASIC4.82□□□□□ -1.64
SSX4O60224 MIR320B1-201ENST00000390209 79 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC009804.1-201ENST00000400949 179 ntBASIC4.82□□□□□ -1.64
SSX4O60224 DPPA2P3-201ENST00000411853 655 ntBASIC4.82□□□□□ -1.64
SSX4O60224 BX664727.1-201ENST00000416024 466 ntBASIC4.82□□□□□ -1.64
SSX4O60224 OR51A6P-201ENST00000418680 1004 ntBASIC4.82□□□□□ -1.64
SSX4O60224 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX4O60224 PNRC2P1-201ENST00000423940 420 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 TMEM183AP1-205ENST00000432739 290 ntBASIC4.82□□□□□ -1.64
SSX4O60224 RPL19P16-201ENST00000433839 588 ntBASIC4.82□□□□□ -1.64
SSX4O60224 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 RNF2P1-201ENST00000442955 1010 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms