Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 NDUFA5P11-201ENST00000567995 343 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 MTCO2P2-201ENST00000591258 225 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC126175.1-201ENST00000617041 758 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC005840.5-201ENST00000619166 599 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC103703.1-201ENST00000634783 663 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 ATF1P1-201ENST00000406040 927 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AL590806.1-201ENST00000415818 853 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 OR51A6P-201ENST00000418680 1004 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC005189.1-201ENST00000431286 310 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 CYCSP24-201ENST00000445119 316 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AL009048.1-201ENST00000450437 298 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 TPT1P1-201ENST00000458495 518 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 RPS20P4-201ENST00000461659 355 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 PPIAP19-201ENST00000486414 492 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 COX6B1P2-201ENST00000489624 230 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC026414.1-201ENST00000504046 698 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 SNORA31.13-201ENST00000516624 135 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 Y_RNA.717-201ENST00000517106 92 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 TMEM97P2-201ENST00000517841 403 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 NPM1P35-201ENST00000533043 868 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AP003717.3-201ENST00000544832 1180 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 MTATP6P24-201ENST00000576835 677 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 SNORD95-201ENST00000579879 68 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AL445435.1-201ENST00000604232 665 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC015982.1-201ENST00000608113 465 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 MIR6778-201ENST00000617912 73 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 AC136428.4-201ENST00000634254 1155 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV7S3A2A0A539 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL672167.1-204ENST00000641875 3017 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RN7SKP199-201ENST00000410325 305 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RPL35AP24-201ENST00000413846 330 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL139148.1-201ENST00000427122 680 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL035458.1-201ENST00000433096 585 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RPS29P10-201ENST00000439197 166 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 BTF3P6-201ENST00000448054 499 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL031313.1-201ENST00000448435 256 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 EXOSC3P1-201ENST00000448649 500 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms