Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC01558Q9Y6Z2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC009229.4-201ENST00000623854 1947 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 USP8P1-201ENST00000494673 3183 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL139805.1-201ENST00000407837 289 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC069218.2-201ENST00000411665 344 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC062016.2-201ENST00000420950 676 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RPL23AP1-201ENST00000428990 471 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL138787.1-202ENST00000437804 898 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 SCAND3P1-201ENST00000439854 1060 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AP000893.1-201ENST00000474462 794 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC078785.3-201ENST00000476607 425 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RPL23AP72-201ENST00000492447 435 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SL182P-201ENST00000496499 300 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 TATDN3-207ENST00000526641 1073 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR4800-201ENST00000537353 80 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC010287.1-201ENST00000566916 357 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC006254.3-201ENST00000603353 884 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RPS4XP21-201ENST00000603814 750 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AP002360.3-201ENST00000607673 710 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL137000.1-201ENST00000610528 1244 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR6511A2-201ENST00000611011 67 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC015922.4-201ENST00000612568 690 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC008121.2-201ENST00000614647 523 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR6511A3-201ENST00000615389 67 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR6511A4-201ENST00000615860 67 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR6511A1-201ENST00000617664 67 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL512652.1-201ENST00000619006 500 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AC087893.2-201ENST00000623272 255 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 CFTRP2-201ENST00000634304 199 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 MIR7153-201ENST00000637758 57 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 RIOK3P1-201ENST00000418778 1528 ntBASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01558Q9Y6Z2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC090229.1-201ENST00000590983 1609 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC009313.2-201ENST00000417893 1941 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms