Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 C1GALT1P3-201ENST00000522049 819 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 COX6B1P6-201ENST00000522347 255 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 WBP1LP3-201ENST00000523033 208 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC125611.1-201ENST00000549563 229 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC087465.1-201ENST00000560574 245 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AADACP1-206ENST00000561502 1193 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC090651.1-201ENST00000567865 634 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AP001267.4-201ENST00000602598 545 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 AC006840.1-201ENST00000623069 542 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 GUCY1B2-204ENST00000531898 1979 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 SGO1P1-201ENST00000603525 1447 ntBASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
PCDHGA3Q9Y5H0 OR13C1P-202ENST00000641378 2919 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC017079.1-201ENST00000333650 415 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 SNORA43.1-201ENST00000364863 140 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 SNORD116-2-201ENST00000384274 95 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 Y_RNA.465-201ENST00000384293 102 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 SNORD116-6-201ENST00000384711 96 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 MIR143-201ENST00000385300 106 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AL445238.1-204ENST00000400311 463 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AL365338.1-201ENST00000422282 858 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 FTLP19-201ENST00000433300 394 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 GTF2IP7-202ENST00000436677 309 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 CBX1P4-201ENST00000439415 457 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AL445466.1-201ENST00000448432 357 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC234781.3-201ENST00000452540 973 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 HMGB1P4-201ENST00000455362 567 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC023141.9-201ENST00000458734 412 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 RN7SL717P-201ENST00000478343 297 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC018442.3-201ENST00000523025 183 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 RPA2P3-201ENST00000533268 770 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC090022.1-201ENST00000546569 311 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC091078.2-201ENST00000557145 559 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC090751.1-201ENST00000566966 267 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 BPTFP1-201ENST00000579209 492 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC008088.1-201ENST00000580993 280 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC022509.4-201ENST00000621404 572 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC017037.3-201ENST00000625016 472 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 GNL2P1-201ENST00000451274 2190 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AP005432.1-201ENST00000580891 3485 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AOX3P-204ENST00000491025 2107 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 RBPJP7-201ENST00000442803 1447 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms