Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP003181.2-201ENST00000528941 181 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 OR5M4P-201ENST00000529436 925 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 DUX4L52-201ENST00000549363 777 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC126177.6-201ENST00000550420 1009 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC090751.1-201ENST00000566966 267 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC091932.1-201ENST00000569381 427 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 ARGFXP2-201ENST00000579304 949 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC090236.2-201ENST00000587933 1101 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC011891.2-201ENST00000604949 397 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC105429.2-201ENST00000610567 517 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC040896.1-201ENST00000613819 479 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AL138693.1-201ENST00000622219 129 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC134503.1-201ENST00000633048 54 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AL590396.3-201ENST00000636334 300 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC100810.6-201ENST00000638068 285 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 AC005614.1-201ENST00000598952 3653 ntBASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB11Q9Y5F2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 BX322650.1-201ENST00000332359 2143 ntBASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 AC092162.3-201ENST00000624511 1624 ntBASIC7.09□□□□□ -1.28
PCDHB11Q9Y5F2 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RNF6P1-201ENST00000444889 1784 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC090114.1-201ENST00000393266 448 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RPL24P7-201ENST00000399435 453 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 CNN3P1-201ENST00000401596 935 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RPS4XP8-201ENST00000402039 771 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RPS20P2-201ENST00000402520 389 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 NCOR1P3-201ENST00000420479 303 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC024082.2-201ENST00000434771 238 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 PMS2P11-201ENST00000451831 574 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC239798.3-201ENST00000454459 408 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 CBX5P1-201ENST00000468470 561 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RPL5P12-201ENST00000477071 851 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RN7SKP116-201ENST00000516902 319 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 SCARNA6.1-201ENST00000516989 238 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 OR5B19P-201ENST00000531766 928 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AL157899.1-201ENST00000604110 936 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AL133215.3-201ENST00000609801 448 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AL137000.1-201ENST00000610528 1244 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 MIR7973-1-201ENST00000614683 76 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 C2orf27A-204ENST00000623058 969 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC145207.9-201ENST00000623802 325 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 CASC19-212ENST00000641153 1287 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AL121950.1-201ENST00000624993 2077 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 MFSD8-217ENST00000641178 4374 ntBASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms