Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC091812.1-201ENST00000432235 1948 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 RN7SKP207-201ENST00000411204 303 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 YWHAZP3-201ENST00000415292 738 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 ACTR3BP6-201ENST00000422332 1241 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 COX6CP15-201ENST00000426313 211 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 GAPDHP32-201ENST00000433816 998 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC016734.1-201ENST00000436998 654 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC239798.1-201ENST00000449024 1176 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 RPL23AP11-201ENST00000475260 469 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AL355076.1-201ENST00000484315 270 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC111193.1-201ENST00000504097 155 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 RNU6-699P-201ENST00000517081 110 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 RNU6-111P-201ENST00000517179 105 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC025252.2-201ENST00000537470 502 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC068993.1-201ENST00000546724 589 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC142086.3-201ENST00000563896 802 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC068802.1-201ENST00000603420 732 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC026108.1-201ENST00000635444 547 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AC068205.4-201ENST00000637880 804 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 UGT2B27P-201ENST00000505092 1620 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS9D1Q9Y2B5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AC016930.1-201ENST00000468766 2205 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 OR5E1P-201ENST00000305754 927 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RNU6-98P-201ENST00000384173 107 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 Y_RNA.462-201ENST00000384268 102 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 Y_RNA.483-201ENST00000384380 101 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RNU6-125P-201ENST00000384505 107 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 MIR30C1-201ENST00000385227 89 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RPS4XP9-201ENST00000405151 780 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AL355375.1-201ENST00000405686 392 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 MIR1252-201ENST00000408861 65 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AL139135.1-201ENST00000412675 209 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 UBE2V1P14-201ENST00000415815 558 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RANP5-201ENST00000427731 655 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RPL7L1P10-201ENST00000427790 463 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 PSMA6P3-201ENST00000428242 164 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AL731534.1-201ENST00000434711 269 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AC005019.1-201ENST00000436455 431 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 FTH1P7-201ENST00000450676 552 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AC090142.1-201ENST00000465776 462 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RN7SL496P-201ENST00000470372 290 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 RN7SL272P-201ENST00000487762 289 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 SCARNA24.1-201ENST00000516465 137 ntBASIC7.75□□□□□ -1.17
VPS9D1Q9Y2B5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms