Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC012618.3-205ENST00000637896 1496 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 RN7SKP115-201ENST00000363177 317 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 CYB5AP4-201ENST00000396692 399 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC013442.1-201ENST00000397347 228 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AL359643.1-201ENST00000404109 423 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 PTP4A1P1-201ENST00000420539 515 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC007559.1-201ENST00000428736 355 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AL691482.1-201ENST00000453255 87 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AL356390.1-201ENST00000455684 397 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 RNA5SP303-201ENST00000516192 130 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 AC104785.1-201ENST00000603220 588 ntBASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC013429.2-201ENST00000418798 781 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 RPA2P2-201ENST00000419698 796 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC004074.1-201ENST00000421810 1063 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 SCAND3P1-201ENST00000439854 1060 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 RPL7AP61-201ENST00000443410 636 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 NPM1P29-201ENST00000483112 803 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 RN7SL346P-201ENST00000491561 294 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 RNU6-943P-201ENST00000516960 98 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 UBE2FP2-201ENST00000566646 462 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 MIR3667-201ENST00000581025 74 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 MIR6820-201ENST00000611508 62 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AL049794.2-201ENST00000616301 365 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC022106.2-201ENST00000620114 757 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 AC019206.1-201ENST00000621938 425 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 MTND5P23-201ENST00000430812 1655 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP2Q9UDT6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
CLIP2Q9UDT6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 RNA5SP113-201ENST00000410486 84 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 Y_RNA.625-201ENST00000411256 107 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 RPL36AP10-201ENST00000421785 322 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC234781.3-201ENST00000452540 973 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AL591473.1-201ENST00000464297 313 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 RPS29P22-201ENST00000472363 168 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 RPL7AP10-201ENST00000481016 791 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC008147.3-201ENST00000548666 354 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC115989.2-201ENST00000578640 563 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC087468.1-201ENST00000604365 630 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms