Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC209154.1-201ENST00000582156 337 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AL137072.1-201ENST00000603444 466 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC011453.2-201ENST00000603737 729 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC233280.2-201ENST00000603917 1070 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 uc_338.18-201ENST00000615451 175 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC008115.4-201ENST00000619780 775 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 OR51H2P-202ENST00000641424 3046 ntBASIC4.51□□□□□ -1.69
VAPAQ9P0L0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.51□□□□□ -1.69
VAPAQ9P0L0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 RNU6-167P-201ENST00000384292 106 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 MIR1286-201ENST00000408112 78 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AC098592.2-201ENST00000413158 265 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 Z68694.1-201ENST00000413929 841 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 OR51A6P-201ENST00000418680 1004 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 PPIAP13-201ENST00000434706 478 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AC093414.1-201ENST00000434712 514 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AC090888.3-201ENST00000558917 509 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AL713998.2-201ENST00000604538 1198 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AL133406.3-201ENST00000606817 541 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 AC004232.3-201ENST00000622977 525 ntBASIC4.5□□□□□ -1.69
VAPAQ9P0L0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VAPAQ9P0L0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AP000542.2-201ENST00000623199 6179 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 OR56B2P-201ENST00000317102 954 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 MIR921-201ENST00000401133 56 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 SEPT7P8-201ENST00000413308 775 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC079807.1-201ENST00000429993 481 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RPL7P11-201ENST00000437586 658 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RAB9AP5-201ENST00000437794 597 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 PRPF38AP2-201ENST00000438179 851 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 HMGB3P9-201ENST00000441799 583 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RAB9AP2-201ENST00000443911 597 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 MTND6P32-201ENST00000457611 483 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 COPS8P2-201ENST00000473228 627 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RPL7P51-201ENST00000490532 749 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AF186190.1-201ENST00000517470 480 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC093799.2-201ENST00000610062 578 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC007497.1-201ENST00000610421 561 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.49□□□□□ -1.69
VAPAQ9P0L0 AC099654.2-201ENST00000433031 1980 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 MIPEPP2-201ENST00000422560 1819 ntBASIC4.49□□□□□ -1.69
VAPAQ9P0L0 HCFC2P1-201ENST00000392864 1592 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 ZNF733P-202ENST00000444809 1573 ntBASIC4.48□□□□□ -1.69
VAPAQ9P0L0 EOGT-210ENST00000615922 1931 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms