Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 Y_RNA.110-201ENST00000363220 99 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 RNU1-149P-201ENST00000390870 161 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 RPS24P12-201ENST00000402084 394 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AL589655.1-201ENST00000405398 482 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AL357078.2-201ENST00000416486 427 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 OR2X1P-201ENST00000421144 687 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 ARAFP1-201ENST00000422172 605 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AL392003.1-201ENST00000434394 243 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC004938.1-201ENST00000438468 308 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 MTND6P18-201ENST00000439477 513 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 RPS6P2-201ENST00000454208 705 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 MTND2P39-201ENST00000457230 764 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AL136038.1-201ENST00000497246 351 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC011411.1-201ENST00000509592 876 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 RNA5SP360-201ENST00000516555 118 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC005000.1-201ENST00000536192 288 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 RPL10P14-201ENST00000565265 298 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 NDUFA5P11-201ENST00000567995 343 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AP002884.5-201ENST00000595053 1132 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC079315.1-201ENST00000602952 623 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AL049794.2-201ENST00000616301 365 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC009237.17-201ENST00000618111 748 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC073592.6-201ENST00000624271 415 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC073593.1-201ENST00000624500 411 ntBASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.75□□□□□ -1.65
NDE1Q9NXR1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC024341.1-201ENST00000526444 1552 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC093909.5-201ENST00000621839 1799 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PANDAR-201ENST00000629595 1506 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC092642.1-201ENST00000392417 425 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ATP5HP3-201ENST00000396994 486 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 SNORA77-201ENST00000408716 125 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 MIR1275-201ENST00000408770 80 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PTP4A1P1-201ENST00000420539 515 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 EIF4EP1-201ENST00000422311 642 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC093655.2-201ENST00000425735 631 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 FAR1P1-201ENST00000427163 934 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RPL7L1P1-201ENST00000448259 785 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 Z92846.1-201ENST00000456203 268 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RPL7P6-201ENST00000480903 738 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC016687.1-201ENST00000482574 353 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 Vault.2-201ENST00000516519 98 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 CYCSP28-201ENST00000534284 321 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AL683826.1-201ENST00000624104 627 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms