Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AP002748.2-201ENST00000528671 348 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC087276.1-201ENST00000529659 480 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 MIR4428-201ENST00000584884 73 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL390838.2-201ENST00000602394 274 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC012510.1-201ENST00000607946 759 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AP000894.4-201ENST00000610185 483 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL161931.1-201ENST00000612768 246 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AL158209.2-201ENST00000619266 216 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC073488.9-201ENST00000631601 754 ntBASIC6.39□□□□□ -1.39
SSU72Q9NP77 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSU72Q9NP77 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.39□□□□□ -1.39
SSU72Q9NP77 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 Y_RNA.372-201ENST00000365599 102 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 MIR16-1-201ENST00000385271 89 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL161909.1-201ENST00000397390 712 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL136100.1-201ENST00000407696 330 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 RPL17P12-201ENST00000413391 526 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC233728.2-201ENST00000425348 757 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 ARMC4P1-201ENST00000438905 707 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC239367.2-201ENST00000447309 705 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 PSPHP1-201ENST00000450062 261 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AP000797.1-201ENST00000478870 387 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AF305872.1-201ENST00000485217 471 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 RPL7P38-201ENST00000488396 739 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC022206.1-201ENST00000495947 347 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 NENFP3-201ENST00000503735 313 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 SNX5P1-201ENST00000505757 1041 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 STMN1P2-201ENST00000508435 439 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 PTGES3P3-201ENST00000511479 482 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC135983.3-201ENST00000528049 1226 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 BPTFP1-201ENST00000579209 492 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 VN1R79P-201ENST00000593540 513 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC233280.2-201ENST00000603917 1070 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL354760.1-201ENST00000608357 643 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL008723.3-201ENST00000608926 449 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC011472.4-201ENST00000615848 491 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 OR8G7P-201ENST00000616658 848 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 AC114786.1-201ENST00000512892 1415 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 SAGE3P-201ENST00000619800 1635 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 AL359091.1-201ENST00000449048 1734 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 HSPD1P1-201ENST00000503199 1726 ntBASIC6.38□□□□□ -1.39
SSU72Q9NP77 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSU72Q9NP77 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.38□□□□□ -1.39
SSU72Q9NP77 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms