Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC116553.2-201ENST00000564203 463 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 ZNF92P2-201ENST00000600543 1059 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC012213.4-201ENST00000606457 354 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC026979.4-201ENST00000606555 645 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AP000894.4-201ENST00000610185 483 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 RPSAP73-201ENST00000614820 330 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MTND5P23-201ENST00000430812 1655 ntBASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDH9Q9HC56 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AL590763.1-201ENST00000398297 1545 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC013442.1-201ENST00000397347 228 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 RNA5SP296-201ENST00000410523 111 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 RN7SKP126-201ENST00000411143 300 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 ZNF965P-201ENST00000432501 817 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 SUMO2P1-206ENST00000445436 284 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AURKAPS1-201ENST00000451805 1212 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AL389915.2-201ENST00000454576 441 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 CABYRP1-201ENST00000465493 1045 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC078857.1-201ENST00000469870 667 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 RN7SL222P-201ENST00000476452 299 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 RN7SL629P-201ENST00000489622 285 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC119751.4-201ENST00000507498 357 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 HMGB3P16-201ENST00000508037 287 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 RNU6-415P-201ENST00000516252 97 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 RNA5SP34-201ENST00000516887 130 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 FTH1P11-201ENST00000517577 551 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 HMGB1P46-201ENST00000520062 610 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 MTND1P6-201ENST00000523621 946 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 OR1AB1P-201ENST00000585564 761 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AP002884.5-201ENST00000595053 1132 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC135178.6-201ENST00000605314 398 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC018645.2-201ENST00000609151 472 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AL163051.2-201ENST00000618976 735 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC009269.6-201ENST00000621778 588 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AL049777.1-201ENST00000622740 518 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 ZNF733P-202ENST00000444809 1573 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 AC245100.2-201ENST00000454544 1679 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH9Q9HC56 PANDAR-201ENST00000629595 1506 ntBASIC5.23□□□□□ -1.57
PCDH9Q9HC56 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 SOCS5P3-201ENST00000425115 1576 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AL022322.2-201ENST00000624072 20397 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 RN7SKP113-201ENST00000363891 295 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 RSL24D1P1-201ENST00000404972 493 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms