Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC092709.1-201ENST00000521355 1045 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC138701.1-201ENST00000524329 714 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 YWHAZP1-201ENST00000556286 722 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 FRG1HP-204ENST00000617940 757 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 U6.48-201ENST00000618523 106 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 TMEM30CP-203ENST00000637814 1035 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL445984.1-201ENST00000637834 659 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AL137100.1-201ENST00000556703 1620 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 TCP11X1-202ENST00000622971 1372 ntBASIC5.15□□□□□ -1.59
BRF2Q9HAW0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BRF2Q9HAW0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC090017.1-201ENST00000548612 1779 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 RNA5SP27-201ENST00000363839 119 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 RNU6-317P-201ENST00000384031 107 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 RPL23AP59-201ENST00000399415 461 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC233289.1-201ENST00000403700 508 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 NCSTNP1-201ENST00000406229 144 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 RNA5SP487-201ENST00000410186 122 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 RPS10P18-201ENST00000442662 495 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 HMGN1P36-201ENST00000446623 298 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC073909.1-201ENST00000447112 999 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC005229.2-201ENST00000456995 399 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AL049874.2-201ENST00000492636 288 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 TMEM97P2-201ENST00000517841 403 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC112191.2-201ENST00000522428 333 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 HMGB1P1-201ENST00000522557 636 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 FO393422.1-201ENST00000603908 708 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 STMN1P1-201ENST00000617809 440 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 MIR6778-201ENST00000617912 73 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC073569.3-201ENST00000619055 682 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC013437.2-201ENST00000639587 677 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AP000756.2-201ENST00000624168 2567 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 PHKBP1-201ENST00000450951 1951 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 AC092376.2-201ENST00000622621 4116 ntBASIC5.14□□□□□ -1.59
BRF2Q9HAW0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF2Q9HAW0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 AL118496.1-201ENST00000440201 1812 ntBASIC5.13□□□□□ -1.59
BRF2Q9HAW0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
BRF2Q9HAW0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms