Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 Z95114.1-201ENST00000624264 14574 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 U3.10-201ENST00000364459 214 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 HSPA8P15-201ENST00000401676 786 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 RN7SL188P-201ENST00000469842 285 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 SNRPCP3-201ENST00000474888 476 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AP000797.2-201ENST00000475768 606 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 TRAV31-201ENST00000502780 342 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC009117.1-201ENST00000563948 554 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC011492.1-201ENST00000600023 315 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC027449.1-201ENST00000608890 407 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AL669942.2-201ENST00000620352 697 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 MIR7641-1-201ENST00000627518 61 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 KYNUP3-201ENST00000574386 1341 ntBASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.45□□□□□ -1.38
RTFDC1Q9BY42 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 MTCO1P18-201ENST00000455518 1419 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 RNU6-207P-201ENST00000384137 107 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 RPS4XP9-201ENST00000405151 780 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ETF1P3-201ENST00000430422 1160 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC092447.2-201ENST00000435487 669 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 CACYBPP1-201ENST00000438592 684 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 HMGN2P25-201ENST00000486956 268 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC026782.2-201ENST00000510845 636 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC021006.3-201ENST00000530771 192 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC090666.1-201ENST00000578241 445 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AP000919.1-202ENST00000581139 1264 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC112503.1-201ENST00000608436 391 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AL356274.1-201ENST00000617064 410 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AC084824.4-201ENST00000620106 731 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AL645568.2-201ENST00000432815 1337 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 AL627171.1-201ENST00000618845 1308 ntBASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RTFDC1Q9BY42 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RTFDC1Q9BY42 CASC19-284ENST00000642142 1868 ntBASIC6.43□□□□□ -1.38
RTFDC1Q9BY42 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RTFDC1Q9BY42 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms