Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC093720.1-201ENST00000505681 714 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SKP265-201ENST00000516448 223 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AL049870.4-201ENST00000555741 486 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC087683.2-201ENST00000611384 326 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC022079.2-201ENST00000619739 566 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AC100757.1-201ENST00000616872 1835 ntBASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP3Q96JB5 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 MIR133A2-201ENST00000347538 102 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 MIR323A-201ENST00000362199 86 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SKP293-201ENST00000411389 296 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RPL5P2-201ENST00000429598 854 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL035551.1-201ENST00000446931 348 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC008280.2-201ENST00000455473 307 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC100832.1-201ENST00000471945 383 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RPL7P51-201ENST00000490532 749 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 HMGB1P44-201ENST00000508597 572 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 OR8G3P-201ENST00000533406 921 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AL049830.4-201ENST00000555149 351 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 MTCYBP23-201ENST00000558717 1102 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC005341.1-201ENST00000571086 708 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC009237.13-201ENST00000603193 276 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 AC010632.3-201ENST00000611377 369 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 SAMMSON-209ENST00000641222 1100 ntBASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP3Q96JB5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP3Q96JB5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP3Q96JB5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP3Q96JB5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 TCP11X1-202ENST00000622971 1372 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 SNORA16A-201ENST00000384342 137 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL603865.2-201ENST00000401679 213 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms