Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 RPS27AP11-201ENST00000402798 447 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL356131.1-201ENST00000405826 414 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL034374.1-201ENST00000406329 351 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 RNA5SP178-201ENST00000410380 128 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 TAF13P2-201ENST00000416876 286 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 UBE2V1P1-201ENST00000430836 445 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 LINC02210-201ENST00000444561 288 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL450996.1-201ENST00000445574 1202 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL450023.1-201ENST00000450868 751 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 CDC42P1-201ENST00000456658 548 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ATG12P2-201ENST00000456830 416 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 USP9YP25-201ENST00000457708 443 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 PSAT1P4-201ENST00000466500 526 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 RN7SL284P-201ENST00000498823 275 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC093890.1-201ENST00000502554 540 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC091951.3-201ENST00000504093 246 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 HPRT1P2-201ENST00000505250 544 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 PRELID3BP4-201ENST00000515476 571 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 NRBF2P4-201ENST00000520874 850 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 OR8Q1P-201ENST00000526467 655 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AP000926.4-201ENST00000527351 454 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 H3F3BP2-201ENST00000583907 357 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC011445.2-201ENST00000599274 173 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC009237.13-201ENST00000603193 276 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 DPRXP5-201ENST00000604662 539 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 CU639417.4-201ENST00000623928 207 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AL512506.2-201ENST00000624472 458 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 MIR4302-201ENST00000638058 60 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ZNF663P-202ENST00000641770 1131 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC068870.1-201ENST00000563737 2455 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 YES1P1-201ENST00000418510 1628 ntBASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTHRC1Q96CG8 AC114774.1-201ENST00000507410 1770 ntBASIC5.21□□□□□ -1.57
CTHRC1Q96CG8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CTHRC1Q96CG8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CTHRC1Q96CG8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.21□□□□□ -1.57
CTHRC1Q96CG8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CTHRC1Q96CG8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.21□□□□□ -1.57
CTHRC1Q96CG8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RNU1-87P-201ENST00000363727 170 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RNU6-532P-201ENST00000384318 107 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RNU6-185P-201ENST00000384421 107 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 PEX12P1-201ENST00000400284 1048 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 SKINT1L-201ENST00000401057 817 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC013404.1-201ENST00000413068 249 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 TCEA1P4-201ENST00000415066 844 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC002504.1-201ENST00000438281 691 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AP000281.1-201ENST00000444036 316 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 EXTL2P1-201ENST00000446218 416 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RSL24D1P3-201ENST00000449255 495 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 PPIAP20-201ENST00000449839 135 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AZGP1P2-201ENST00000454506 345 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 PRDX3P4-201ENST00000470828 747 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms