Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL606490.1-201ENST00000452266 765 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC104164.3-201ENST00000467363 1258 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 RPS24P16-201ENST00000497294 392 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC021106.1-201ENST00000509020 1058 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC090022.1-201ENST00000546569 311 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 CYB5AP5-201ENST00000549779 389 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC012254.4-201ENST00000588843 273 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC006363.1-201ENST00000603806 463 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC024023.1-201ENST00000624530 922 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 OR9K1P-201ENST00000326513 941 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 OR4K12P-201ENST00000406538 961 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 Z80107.1-201ENST00000436830 412 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 CYCSP12-201ENST00000437729 300 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 HMGB1P38-201ENST00000490557 577 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 RNA5SP92-201ENST00000516437 110 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 NRBF2P4-201ENST00000520874 850 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AL049838.1-201ENST00000563647 981 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC015720.2-201ENST00000567709 334 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC016180.1-201ENST00000567945 403 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 RBM22P1-201ENST00000578589 1214 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC012616.1-201ENST00000600294 197 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AP002802.2-201ENST00000605877 235 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC000068.2-201ENST00000608816 460 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC068787.1-201ENST00000623908 691 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 AC235565.1-201ENST00000456962 1325 ntBASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHMP4CQ96CF2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 RNU4-2-201ENST00000365668 141 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 RNU6-532P-201ENST00000384318 107 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 SNORA11B-201ENST00000408175 129 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 DPPA2P3-201ENST00000411853 655 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 MTCO2P8-201ENST00000412213 658 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 OR13Z1P-201ENST00000416141 834 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 RPL34P26-201ENST00000445636 354 ntBASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.48□□□□□ -1.37
CHMP4CQ96CF2 AL109741.3-201ENST00000561748 592 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms